CRS DDI-MWI-MEIRU-TB-LIS-1979-01 Themba Chirwa Elizabeth Nancy Munthali Chifundo Kanjala Jacky Saul Keith Branson Malawi Epidemiology and Intervention Research Unit 2018-08-28 Nesstar Publisher version 1 (January 2018) LIS Latent TB infection phase 1 and 2 2009 MWI-MEIRU-TB-LIS-2008-v01 Dr. Anne Ben-Smith Prof. Amelia C Crampin

MEIRU Core datamanagement team

Dr Neil French, Programme Director Professor Hazel Dockrell Mr Hazzie Mvula, Epidemiologist KPS/MEIRU Dr Nuala McGrath, Field Director Dr Andreas Jahn, Epidemiologist Michael Kayange Felanji Simukonda Themba Mzembe 2016-10-27 Nesstar Publisher Wellcome Trust, UK Intervention Study Malawi Karonga district Individual, Household Observational episodes Malawi Epidemiology and Intervention Research Unit Face-to-face [f2f] Karonga District Malawi Epidemiology and Intervention Research Unit tb_lis2.NSDstat 2235 41 Nesstar 200801 Malawi Epidemiology and Interventions Research Unit tb_lis.NSDstat 1647 39 Nesstar 200801 Malawi Epidemiology and Interventions Research Unit tb_tbi.NSDstat 2684 253 Nesstar 200801 Malawi Epidemiology and Interventions Research Unit tb_tbid.NSDstat 578 29 Nesstar 200801 Malawi Epidemiology and Interventions Research Unit Tb Lis Tb_tbid Tb_tbi VITAL STATUS HOUSEHOLD RESIDENCE TB HISTORY/ CASE FINDING OTHERS Identity Others Identity History Specimens collected During followup visits for females only Others Other forms filled Main unique identifier in Karonga Main unique identifier in Karonga 2235 0 Original Ident in Karonga Original Identifier in Karonga 2235 0 Study identifier in Kaonga and Lilongwe Study identifier 2235 0 Valid STID Contact number in Kaonga and Lilongwe Contact number 2235 0 Valid CNO Interview date interview date 2235 >= 01/10/2008 and < = current date Recorder Staff code 2235 0 valid code in val_staff ADL status Is named person above alive, dead or left Karonga District? 2235 0 1 Alive 1350 2 Dead 357 3 Left 453 4 Missed 0 8 Unknown 75 9 Missing 0 Death date If (adl = 2 = dead), date of death(dd/mm/yyyy) 357 = 01/01/1980 and <= current date or blank, must be blank if ADL status <> 2]]> Date of death estimate death date incomplete 300 1935 1 Full date known 0 2 Day unknown 66 3 Month unknown 0 4 Day and month unknown 234 8 Not known at all 0 9 Missing 0 Sysmiss 1935 If full date leave blank Left date If (adl = 3 = left Karonga District), date of departure(dd/mm/yyyy) 453 = 01/01/1980 and <= current date or blank, must be blank if ADL status <> 3]]> Left date incomplete left date incomplete 417 1818 1 Full date known 0 2 Day unknown 61 3 Month unknown 0 4 Day and month unknown 356 8 Not known at all 0 9 Missing 0 Sysmiss 1818 If full date leave blank Temp/permanent departure If (adl = 3 = left Karonga District), is this a temporary or permanent departure? 428 1807 1 Temporary 382 2 Permanent 46 8 Unknown 0 9 Missing 25 Sysmiss 1782 must be blank if ADL status (adl) <> 3 Alive date If (adl = 8 = Unknown), what was the last date the person was known alive? 75 = 01/01/1980 and <= current date or blank, must be blank if ADL status <> 8]]> Alive date incomplete alive date incomplete 21 2214 1 Full date known 0 2 Day unknown 2 3 Month unknown 0 4 Day and month unknown 19 8 Not known at all 0 9 Missing 0 Sysmiss 2214 If full date leave blank Relationhip of informant relationhip of informant 2199 36 0 No informant 42 1 Relative 3 2 Neighbour 204 3 Visitor to h/hold 1 4 Friend 7 5 Colleague at work 2 6 Someone visited 1 7 Other 76 8 Self 911 9 Parent/step-parent 154 10 Spouse 228 11 Sibling 176 12 Child 111 13 Uncle/aunt 51 14 G/mother/father/step 27 15 Mother/father-inlaw 17 16 Sister/brother-inlaw 79 17 Cousin 35 18 Nephew/niece 16 19 Wifemate 3 20 Grandson/daughter 35 21 Uncle/aunt in-law 2 22 Son/daughter in-law 18 23 Distant cousin/relation 0 98 Unknown 0 99 Not recorded/missing 36 valid code in val_relship Unique identifier of head of household in Karonga Current household ident 1145 0 1;]]> original ident of head of household Current household origid 1145 0 1;]]> name of head of household Current household name head 205 0 must be entered if ident of head blank, must be blank if ADL status (adl) <> 1 Current Village Current village 1799 0 1 or 3, If ADL status = 3 then enter if known]]> GPS south degrees gps south degrees 1350 885 range: 9.53:10.66 GPS south minutes gps south minutes 1350 885 range: 9.53:10.66 GPS east degrees gps east degrees 1350 885 range: 33.45:34.27 GPS east minutes gps east minutes 1350 885 range: 33.45:34.27 Have you ever been treated for TB before? If (pretrttb = 1 =Yes), where and year 1341 894 0 No 1229 1 Yes 57 8 Unknown 55 9 Missing 9 Sysmiss 885 previous TB treatment estimate Have you ever been treated for TB before?: previous treatment estimate 0 2235 0 ??? 0 1 1890-99 0 2 1900-09 0 3 1910-19 0 4 1920-29 0 5 1930-39 0 6 1940-49 0 7 1950-59 0 8 1960-69 0 9 1970-79 0 10 1980-89 0 11 1990-99 0 12 <1900 0 13 1900-13 0 14 1914-33 0 15 1934-45 0 16 1946-57 0 17 1958-63 0 18 >1964 0 97 Not applicable 0 98 Unknown 0 99 Missing 2 Sysmiss 2233 must be blank if Previous TB treatment (pretrttb) <> 1 previous treatment year Have you ever been treated for TB before?: previous treatment year 55 2180 1]]> Where previously treated Have you ever been treated for TB before?: previous treatment place 57 0 5999, 1000 or blank Must be entered if Previous TB treatment = 1 Must be blank if Previous TB treatment <> 1]]> Cough Do you have a cough? 915 1320 0 No 893 1 Yes 22 8 Unknown 0 9 Missing 435 Sysmiss 885 must be blank if ADL status (adl) <> 1 Cough weeks (if (cough) = more than 2 months, give MM/YYYY when cough started) Duration of cough; number of weeks 13 2222 98 Unknown 99 Missing 1 must be blank if ADL status (adl) <> 1]]> Cough months 3 2232 1 January 1 2 February 1 3 March 0 4 April 0 5 May 0 6 June 0 7 July 0 8 August 0 9 September 0 10 October 0 11 November 0 12 December 1 77 Not applicable 0 98 Unknown 0 99 Missing 0 Sysmiss 2232 1, must be entered if coughyy entered must be blank if ADL status (adl) <> 1]]> Cough year When cough started: Year 3 2232 1,must be entered if coughmm entered must be blank if ADL status (adl) <> 1]]> Haemoptysis haemoptysis 22 2213 0 No 21 1 Yes 1 8 Unknown 0 9 Missing 0 Sysmiss 2213 must be blank if cough (cough) <> 1, must be blank if ADL status (adl) <> 1 Sputum collected If cough >3 weeks / haemoptysis / TB suspect on other grounds On the spot sputum collected? 22 2213 0 No 7 1 Yes 15 8 Unknown 0 9 Missing 0 Sysmiss 2213 must be blank if cough (cough) = 0, must be blank if ADL status (adl) <> 1 Sputum container given If cough >3 weeks / haemoptysis / TB suspect on other grounds sputum container given? 22 2213 0 No 7 1 Yes 15 8 Unknown 0 9 Missing 0 Sysmiss 2213 must be blank if cough (cough) <> 1, must be blank if ADL status (adl) <> 1 coder coder 2235 0 valid code in val_staff checker checker 2235 0 valid code in val_staff entry by entry by 2235 0 updateby updateby 104 0 entry date entry date 2235 update date updatedate 104 verified verified 2235 0 0 No 0 1 Yes 2235 8 Unknown 0 9 Missing 0 Main unique identifier in Karonga Main unique identifier in Karonga 1647 0 Interview date interview date 1647 >= 01/10/2008 and < = current date Original Identifier in Karonga Original Identifier in Karonga 1647 0 Recorder Staff code 1647 0 valid code in val_staff ADL status Is named person above alive, dead or left Karonga District? 1647 0 1 Alive 825 2 Dead 527 3 Left 247 4 Missed 0 8 Unknown 48 9 Missing 0 Death date If (adl = 2 = dead), date of death(dd/mm/yyyy) 527 = 01/01/1980 and <= current date or blank, must be blank if ADL status <> 2;]]> Date of death estimate death date incomplete 491 1156 1 Full date known 0 2 Day unknown 110 3 Month unknown 0 4 Day and month unknown 381 8 Not known at all 0 9 Missing 0 Sysmiss 1156 If full date leave blank Left date If (adl = 3 = left Karonga District), date of departure(dd/mm/yyyy) 247 = 01/01/1980 and <= current date or blank, must be blank if ADL status <> 3;]]> Left date incomplete left date incomplete 244 1403 1 Full date known 0 2 Day unknown 28 3 Month unknown 0 4 Day and month unknown 216 8 Not known at all 0 9 Missing 0 Sysmiss 1403 If full date leave blank Temp/permanent departure If (adl = 3 = left Karonga District), is this a temporary or permanent departure? 208 1439 1 Temporary 192 2 Permanent 16 8 Unknown 0 9 Missing 39 Sysmiss 1400 must be blank if ADL status (adl) <> 3 Alive date If (adl = 8 = Unknown), what was the last date the person was known alive? 48 = 01/01/1980 and <= current date or blank, must be blank if ADL status <> 8;]]> Alive date incomplete alive date incomplete 9 1638 1 Full date known 0 2 Day unknown 0 3 Month unknown 0 4 Day and month unknown 9 8 Not known at all 0 9 Missing 0 Sysmiss 1638 If full date leave blank Relationhip of informant relationhip of informant 1579 68 0 No informant 0 1 Relative 5 2 Neighbour 287 3 Visitor to h/hold 0 4 Friend 1 5 Colleague at work 5 6 Someone visited 4 7 Other 33 8 Self 690 9 Parent/step-parent 75 10 Spouse 102 11 Sibling 92 12 Child 123 13 Uncle/aunt 20 14 G/mother/father/step 11 15 Mother/father-inlaw 7 16 Sister/brother-inlaw 44 17 Cousin 13 18 Nephew/niece 8 19 Wifemate 14 20 Grandson/daughter 18 21 Uncle/aunt in-law 1 22 Son/daughter in-law 26 23 Distant cousin/relation 0 98 Unknown 0 99 Not recorded/missing 68 valid code in val_relship Unique identifier of head of household in Karonga Current household ident 709 0 1;]]> original ident of head of household Current household origid 709 0 1;]]> name of head of household Current household name head 116 0 must be entered if ident of head blank, must be blank if ADL status (adl) <> 1; Current Village Current village 1071 0 1 or 3, If ADL status = 3 then enter if known;]]> GPS south degrees gps south degrees 825 822 range: 9.53:10.66 GPS south minutes gps south minutes 825 822 range: 9.53:10.66 GPS east degrees gps east degrees 825 822 range: 33.45:34.27 GPS east minutes gps east minutes 825 822 range: 33.45:34.27 Have you ever been treated for TB before? 821 826 0 No 795 1 Yes 19 8 Unknown 7 9 Missing 4 Sysmiss 822 previous TB treatment estimate Have you ever been treated for TB before?: previous treatment estimate 0 1647 0 ??? 0 1 1890-99 0 2 1900-09 0 3 1910-19 0 4 1920-29 0 5 1930-39 0 6 1940-49 0 7 1950-59 0 8 1960-69 0 9 1970-79 0 10 1980-89 0 11 1990-99 0 12 <1900 0 13 1900-13 0 14 1914-33 0 15 1934-45 0 16 1946-57 0 17 1958-63 0 18 >1964 0 97 Not applicable 0 98 Unknown 0 99 Missing 0 Sysmiss 1647 must be blank if Previous TB treatment (pretrttb) <> 1 previous TB treatment year Have you ever been treated for TB before?: previous treatment year 19 1628 1]]> Where previously treated Have you ever been treated for TB before?: previous treatment place 19 0 5999, 1000 or blank Must be entered if Previous TB treatment = 1 Must be blank if Previous TB treatment <> 1]]> Cough Do you have a cough? 801 846 0 No 789 1 Yes 12 8 Unknown 0 9 Missing 24 Sysmiss 822 must be blank if ADL status (adl) <> 1 Cough weeks (if (cough) = more than 2 months, give MM/YYYY when cough started) Duration of cough; number of weeks 11 1636 98 Unknown 99 Missing 1 must be blank if ADL status (adl) <> 1]]> Cough months 1 1646 1 January 0 2 February 0 3 March 0 4 April 0 5 May 0 6 June 0 7 July 0 8 August 0 9 September 0 10 October 1 11 November 0 12 December 0 77 Not applicable 0 98 Unknown 0 99 Missing 0 Sysmiss 1646 1,must be entered if coughyy entered must be blank if ADL status (adl) <> 1]]> Cough year When cough started?: Year 1 1646 1, must be entered if coughmm entered must be blank if ADL status (adl) <> 1]]> Haemoptysis haemoptysis 9 1638 0 No 9 1 Yes 0 8 Unknown 0 9 Missing 3 Sysmiss 1635 must be blank if cough (cough) <> 1, must be blank if ADL status (adl) <> 1; Sputum collected If cough >3 weeks / haemoptysis / TB suspect on other grounds On the spot sputum collected? 9 1638 0 No 5 1 Yes 4 8 Unknown 0 9 Missing 3 Sysmiss 1635 must be blank if cough (cough) = 0, must be blank if ADL status (adl) <> 1; Sputum container given If cough >3 weeks / haemoptysis / TB suspect on other grounds sputum container given? 8 1639 0 No 4 1 Yes 4 8 Unknown 0 9 Missing 4 Sysmiss 1635 must be blank if cough (cough) <> 1, must be blank if ADL status (adl) <> 1; coder coder 1647 0 valid code in val_staff checker checker 1647 0 valid code in val_staff entry by entry by 1646 0 updateby updateby 106 0 entry date entry date 1646 updatedate updatedate 106 verified verified 1647 0 0 No 0 1 Yes 1647 8 Unknown 0 9 Missing 0 Study identifier in Karonga and Lilongwe Study identifier 2684 0 Contact number in Karonga and Lilongwe Contact number 2684 0 Form version Form version 2684 0 range 1:16 Old TB study number Old TB study number 1796 0 Section 1 interview date Section 1 interview date 2684 = 18/06/2007 and <= current date Or >= 10/01/2011 and <= current date if version >= 09]]> Section 1 staffcode 2684 0 Section 1 interview place Place of interview: intplace1 2684 0 1 Home 1066 2 KDH 1237 3 CRH 357 4 Other (specify) 24 8 Unknown 0 9 Missing 0 Available in versions -, 01, 03, 04, 05, 06, 07, 08, 09, 10, 11, 12, 16 Original Identifier in Karonga Original Ident in Karonga 2684 0 Main Unique Identifier in karonga Main unique identifier in Karonga 2684 0 TBI filled for Biomarker Is TBI filled for Biomarker 2299 385 0 No 1082 1 Yes 1217 8 Unknown 0 9 Missing 0 Sysmiss 385 = 11]]> TBI filled for Immunology Is TBI filled for Immunology? 2432 252 0 No 1377 1 Yes 1055 8 Unknown 0 9 Missing 0 Sysmiss 252 = 11]]> TBI filled for Long Term Infection Is TBI filled for LIS study? 1223 1461 0 No 928 1 Yes 295 8 Unknown 0 9 Missing 0 Sysmiss 1461 Must be blank if version = 01 or 02 or 03 or 09 or 10 TBI filled for TSD Is TBI filled for TSD study? 709 1975 0 No 237 1 Yes 472 8 Unknown 0 9 Missing 0 Sysmiss 1975 Follow up point Study follow up round (month) 2684 0 0 baseline 1594 1 1 month 0 2 Second visit 37 3 6 month visit 535 4 18 month visit 244 5 24 months visit 273 6 Progressor 1 8 Unknown 0 9 Missing 0 = 09]]> 24 month screen only 24 month screen only 655 2029 0 No 0 1 Yes 655 8 Unknown 0 9 Missing 0 Sysmiss 2029 Available in versions -,, 05, 06, 07, 08, 16 Section 2 interview date Section 2 interview date 2684 = 18/06/2007 and <= current date Or >= 10/01/2011 and <= current date if version >= 09, >= Section 1 interview date]]> Section 2 staffcode Section 2 Staff code 2684 0 Section 2 interview place Place of interview: intplace2 2684 0 1 Home 1061 2 KDH 1225 3 CRH 365 4 Other (specify) 33 8 Unknown 0 9 Missing 0 Available in versions -, 01, 03, 04, 05, 06, 07, 08, 09, 10, 11, 12, 16 Reason for recruitment Reason for recruitment 2684 0 1 TB case 645 2 Well control 791 3 Sick control 481 4 Long term infection 295 5 Detected TB case 0 6 TB suspect 472 8 Unknown 0 9 Missing 0 Venous blood taken Venous blood drawn? If (blood = 0 = No), state reason, If yes what samples 2029 655 0 No 7 1 Yes 2022 8 Unknown 0 9 Missing 0 Sysmiss 655 Available in versions -,, 01, 03, 04, 09, 10, 11, 12 Currently prregnant Are you currently pregnant or have you been pregnant in the past three months? 636 2048 0 No 601 1 Yes 33 2 Suspected 2 3 Refused to answer 0 8 Unknown 0 9 Missing 0 Sysmiss 2048 Tested and pregnant If (pregnant1= 2 = suspected), perform pregnancy test on urine sample. Is participant pregnant? 234 2450 0 No 227 1 Yes 7 2 Suspected 0 3 Refused to answer 0 8 Unknown 0 9 Missing 0 Sysmiss 2450 3]]> Section 3 interview date Section 3 interview date 2684 = 18/06/2007 and <= current date, or >= 10/01/2011 and <= current date if version = 09, >= Section 1 interview date]]> Section 3 staffcode Section 3 Staff code 2684 0 Section 3 interview place Place of interview: intplace3 2684 0 1 Home 733 2 KDH 1377 3 CRH 524 4 Other (specify) 50 8 Unknown 0 9 Missing 0 Available in versions -, 01, 03, 04, 05, 06, 07, 08, 09, 10, 11, 12, 16 Current medical history Current medical history 2684 0 1 Not acutely unwell/Asymptomaic 1589 2 TB case 464 3 Illiness 631 8 Unknown 0 9 Missing 0 Available in versions -, 01, 03, 04, 05, 06, 07, 08, 09, 10, 11, 12, 16 Current symptom 1 Current symptom : cursymp1 1630 0 Current symptom 1 duration Current symptom duration: cursymp1days 1630 0 Current symptom 2 Current symptom : cursymp2 1130 0 Current symptom 2 duration Current symptom duration: cursymp2days 1130 1554 998 Unknown 999 Missing Current symptom 3 Current symptom : cursymp3 687 0 Current symptom 3 duration Current symptom duration: cursymp3days 687 1997 998 Unknown 999 Missing Current symptom 4 Current symptom : cursymp4 314 0 Current symptom 4 duration Current symptom duration: cursymp4days 314 2370 998 Unknown 999 Missing Current symptom 5 Current symptom : cursymp5 97 0 Current symptom 5 duration Current symptom duration: cursymp5days 97 2587 998 Unknown 999 Missing NYHA score NYHA score 537 2147 0 No limitations - Ordinary physical activity does not cause undue dyspnea 1 Minor limitations - comfortable at rest. Ordinary physical activity (climbing stairs, cleaning house) results in dyspnea 2 3 8 Unknown 9 Missing Walking How difficult is it for you to perform the following activities without any kind of assistance at all?: walking 582 2102 0 No difficulty 535 1 Slight difficult 33 2 Moderate difficulty 13 3 Severe difficulty 1 4 Unable to carry out activity 0 8 Unknown 0 9 Missing 0 Sysmiss 2102 Washing How difficult is it for you to perform the following activities without any kind of assistance at all?: washing 582 2102 0 No difficulty 575 1 Slight difficult 3 2 Moderate difficulty 4 3 Severe difficulty 0 4 Unable to carry out activity 0 8 Unknown 0 9 Missing 0 Sysmiss 2102 Toileting How difficult is it for you to perform the following activities without any kind of assistance at all?: toileting 582 2102 0 No difficulty 578 1 Slight difficult 1 2 Moderate difficulty 3 3 Severe difficulty 0 4 Unable to carry out activity 0 8 Unknown 0 9 Missing 0 Sysmiss 2102 Dressing How difficult is it for you to perform the following activities without any kind of assistance at all?: dressing 582 2102 0 No difficulty 578 1 Slight difficult 2 2 Moderate difficulty 2 3 Severe difficulty 0 4 Unable to carry out activity 0 8 Unknown 0 9 Missing 0 Sysmiss 2102 Eating How difficult is it for you to perform the following activities without any kind of assistance at all?: eating 582 2102 0 No difficulty 579 1 Slight difficult 3 2 Moderate difficulty 0 3 Severe difficulty 0 4 Unable to carry out activity 0 8 Unknown 0 9 Missing 0 Sysmiss 2102 Karnofsky score Karnofsky Score (10% = moribound, 100% = fully healthy) see protocol for explanation 582 0 060 2 070 3 080 40 090 284 100 238 XXX 15 Pneumonia Have you ever had Pneumonia? if (pneumonia=1 = yes), how long ago? 2029 655 0 No 1750 1 Yes 273 8 Unknown 3 9 Missing 3 Sysmiss 655 Available in versions -,, 01, 03, 04, 09, 10, 11, 12 Pneumonia when in months ago if (pneumonia= 1= yes), how long ago? 273 2411 998 Unknown 999 Missing 1, Must be 000 if < 1 month]]> High blood pressure Have you ever had: high blood pressure? 2028 656 0 No 1942 1 Yes 79 8 Unknown 7 9 Missing 1 Sysmiss 655 Available in versions -,, 01, 03, 04, 09, 10, 11, 12 Cancer Have you ever had: Cancer (i.e. KS, lymphoma, in female breast or cervical)? 2027 657 0 No 2022 1 Yes 2 8 Unknown 3 9 Missing 2 Sysmiss 655 Available in versions -,, 01, 03, 04, 09, 10, 11, 12 Diabetes 2029 655 0 No 2024 1 Yes 1 8 Unknown 4 9 Missing 0 Sysmiss 655 Available in versions -,, 01, 03, 04, 09, 10, 11, 12 Meningitis Have you Ever had: Meningitis? if (meningitis =1 = yes), how long ago? 2028 656 0 No 2019 1 Yes 9 8 Unknown 0 9 Missing 1 Sysmiss 655 Available in versions -,, 01, 03, 04, 09, 10, 11, 12 Meningitis when in months ago if (meningitis =1= yes), how long ago? 9 2675 998 Unknown 999 Missing 1, Must be 000 if < 1 month]]> Have you Ever had: Seizures? if (seizure=1= yes), how long ago? 2025 659 0 No 2001 1 Yes 24 8 Unknown 0 9 Missing 4 Sysmiss 655 Available in versions -,, 01, 03, 04, 09, 10, 11, 12 Seizures when in months ago if (seizure=1= yes), how long ago? 24 2660 998 Unknown 999 Missing 1, Must be 000 if < 1 month]]> Other medical history Is there any other significant past medical history? 2004 680 0 No 1508 1 Yes 496 8 Unknown 0 9 Missing 25 Sysmiss 655 Available in versions -,, 01, 03, 04, 09, 10, 11, 12 Regular medication Are you taking any regular medication (other than those recorded on the RTR form, but including oral contraceptive or DEPO injections)? 2684 0 0 No 1698 1 Yes 986 8 Unknown 0 9 Missing 0 Available in versions -, 01, 03, 04, 05, 06, 07, 08, 09, 10, 11, 12, 16 Drug 1 Are you taking any regular medication: Drug 1? 986 0 1]]> Drug 2 Are you taking any regular medication: drug2? 704 0 1]]> Drug 3 Are you taking any regular medication: Drug 3? 495 0 1]]> Taken steroids Have you ever taken steroids? (e.g. prednisolone, dexamethasone, betamethasone)? if (steroids = 1= yes), how long ago? 2669 15 0 No 2650 1 Yes 14 8 Unknown 5 9 Missing 15 Available in versions -, 01, 03, 04, 05, 06, 07, 08, 09, 10, 11, 12, 16 Taken steroids when in months ago if (steroids = 1= yes), how long ago? 13 2671 98 Unknown 99 Missing 1, Must be 00 if < 1 month]]> Taken chemotherapy Have you taken chemotherapy for cancer (e.g. vincristine, methotrexate)? if (chemothp = 1= yes), how long ago? 2663 21 0 No 2658 1 Yes 5 8 Unknown 0 9 Missing 21 Available in versions -, 01, 03, 04, 05, 06, 07, 08, 09, 10, 11, 12, 16 Taken chemotherapy when in months ago taken chemotherapy for cancer: how long ago? 3 2681 2 2 24 1 98 Unknown 0 99 Missing 2 Sysmiss 2679 1, Must be 00 if < 1 month]]> Night sweats Are you currently experiencing: Night sweats 2681 3 0 No 2245 1 Yes 434 8 Unknown 2 9 Missing 3 Available in versions -, 01, 03, 04, 05, 06, 07, 08, 09, 10, 11, 12, 16 Night sweats weeks Night sweats weeks 434 2250 98 Unknown 99 Missing 1, Must be 00 if < 1 month]]> Fevers Are you currently experiencing Fevers? 2682 2 0 No 1985 1 Yes 696 8 Unknown 1 9 Missing 2 Available in versions -, 01, 03, 04, 05, 06, 07, 08, 09, 10, 11, 12, 16 Fevers weeks Fevers weeks 696 1988 98 Unknown 99 Missing 1, Must be 00 if < 1 month]]> Anorexia Are you currently experiencing: anorexia? 2680 4 0 No 2300 1 Yes 378 8 Unknown 2 9 Missing 4 Available in versions -, 01, 03, 04, 05, 06, 07, 08, 09, 10, 11, 12, 16 Anorexia weeks Anorexia weeks 378 2306 98 Unknown 99 Missing 1, Must be 00 if < 1 month]]> Malaise Are you currently experiencing: Malaise? 2680 4 0 No 2113 1 Yes 565 8 Unknown 2 9 Missing 4 Available in versions -, 01, 03, 04, 05, 06, 07, 08, 09, 10, 11, 12, 16 Malaise weeks Malaise weeks 565 2119 98 Unknown 99 Missing 1, Must be 00 if < 1 month]]> Weight loss Weight loss (unexplained/not intentional) If (wtloss = 1= yes), how much weight loss 2675 9 0 No 1653 1 Yes 1016 8 Unknown 6 9 Missing 9 Available in versions -, 01, 03, 04, 05, 06, 07, 08, 09, 10, 11, 12, 16 Weight loss severity how much weight loss: 1007 1677 1 Mild/moderate 703 2 Severe 304 8 Unknown 0 9 Missing 9 Sysmiss 1668 1]]> Skin rash in past month Do you have or have you had any skin rashes in the past month? 2675 9 0 No 2508 1 Yes 167 8 Unknown 0 9 Missing 9 Available in versions -, 01, 03, 04, 05, 06, 07, 08, 09, 10, 11, 12, 16 Skin rash blister If (skinrash=1=yes), does/did it blister? 163 2521 0 No 136 1 Yes 27 8 Unknown 0 9 Missing 4 Sysmiss 2517 1]]> Skin rash papular If (skinrash=1=yes), was it raised (papular)? 162 2522 0 No 52 1 Yes 110 8 Unknown 0 9 Missing 5 Sysmiss 2517 1]]> Skin rash lesion size If (skinrash=1=yes), were lesions typically: 158 2526 1 Greater than 1cm in diameter 50 2 Less than 1cm in diameter 62 3 Pin point 46 8 Unknown 0 9 Missing 9 Sysmiss 2517 1]]> Skin rash itchy If (skinrash=1=yes), are the lesions itchy? 161 2523 0 No 34 1 Yes 127 8 Unknown 0 9 Missing 6 Sysmiss 2517 1]]> Herpes zoster Is there an acute or old herpes zoster scar? 2634 50 0 No 2396 1 Yes 237 8 Unknown 1 9 Missing 50 Available in versions -, 01, 03, 04, 05, 06, 07, 08, 09, 10, 11, 12, 16 Papular pruritic rash Is there a generalized papular pruritic rash (PPE)? 2660 24 0 No 2617 1 Yes 43 8 Unknown 0 9 Missing 24 Available in versions -, 01, 03, 04, 05, 06, 07, 08, 09, 10, 11, 12, 16 seborrhoeic dermatitis Is there seborrhoeic dermatitis? 2664 20 0 No 2639 1 Yes 24 8 Unknown 1 9 Missing 20 Available in versions -, 01, 03, 04, 05, 06, 07, 08, 09, 10, 11, 12, 16 Kaposi’s sarcoma Are there any lesions suspicious of Kaposi's sarcoma? 2662 22 0 No 2653 1 Yes 8 8 Unknown 1 9 Missing 22 Available in versions -, 01, 03, 04, 05, 06, 07, 08, 09, 10, 11, 12, 16 diagrams been used to locate lesions Has diagrams been used to locate lesions? 2684 0 0 No 2554 1 Yes 130 8 Unknown 0 9 Missing 0 Available in versions -, 01, 03, 04, 05, 06, 07, 08, 09, 10, 11, 12, 16 Chest pain Do you have chest pains? 2682 2 0 No 1826 1 Yes 853 8 Unknown 3 9 Missing 2 Available in versions -, 01, 03, 04, 05, 06, 07, 08, 09, 10, 11, 12, 16 Chest pain location if (chpain =1 = Yes), Chest pain location? 843 1841 1 Central 162 2 Pleuritic 476 3 Undefined 205 9 Missing 10 Sysmiss 1831 1]]> Shortness of breath Are you suffering from shortness of breath? 2651 33 0 No 1989 1 Yes 661 8 Unknown 1 9 Missing 33 Available in versions -, 01, 03, 04, 05, 06, 07, 08, 09, 10, 11, 12, 16 Shortness of breath when Shortness of breath when 645 2039 1 On moderate exertion 233 2 On minimal exertion 252 3 At rest 160 8 Unknown 0 9 Missing 16 Sysmiss 2023 1]]> Cough Do you cough? If (cough2=1=yes) duration 2671 13 0 No 1616 1 Yes 1055 8 Unknown 0 9 Missing 13 Available in versions -, 01, 03, 04, 05, 06, 07, 08, 09, 10, 11, 12, 16 Cough weeks if (cough2 = 1= Yes), Cough duration: 1055 1629 98 Unknown 99 Missing 1. Must be 00 if < 1 month]]> Cough up sputum if (cough2 = 1= Yes),do you cough up sputum? 1027 1657 0 No 221 1 Yes 806 8 Unknown 0 9 Missing 28 Sysmiss 1629 1]]> Cough up blood Do you ever cough up blood? 2171 513 0 No 2000 1 Yes 171 8 Unknown 0 9 Missing 513 Available in versions -, 01, 03, 04, 05, 06, 07, 08, 09, 10, 11, 12, 16 Sputum collected Sputum collected? GP-form must be filled for TB suspects 1503 1181 0 No 939 1 Yes 564 8 Unknown 0 9 Missing 651 Sysmiss 530 Available in versions -, 01, 03, 04, 05, 06, 07, 08, 09, 10, 11, 12, 16 Reason sputum not collected if (sputcoll2 = 0= No),Reason sputum not collected 920 1764 1 No cough 695 2 Sputum was collectd in th last 3 month 50 3 Cough, but no sputum production 80 4 Other (specify) 95 8 Unknown 0 9 Missing 670 Sysmiss 1094 Palpitations Do you ever get palpitations? 1966 718 0 No 1458 1 Yes 504 8 Unknown 4 9 Missing 63 Sysmiss 655 Available in versions -,, 01, 03, 04, 09, 10, 11, 12 Mouth sores Do you have any sores in the mouth? 2684 0 0 No 2579 1 Yes 105 8 Unknown 0 9 Missing 0 Available in versions -, 01, 03, 04, 05, 06, 07, 08, 09, 10, 11, 12, 16 Mouth sores weeks if (sores = 0 = No), Mouth sores weeks 105 2579 98 Unknown 99 Missing 1, Must be 00 if < 1 month]]> Pain on swallowing Do you have chest pain on swallowing liquids or food? 2669 15 0 No 2582 1 Yes 83 8 Unknown 4 9 Missing 15 Available in versions -, 01, 03, 04, 05, 06, 07, 08, 09, 10, 11, 12, 16 Vomiting Have you been vomiting within the past two weeks? 2682 2 0 No 2455 1 Yes 226 8 Unknown 1 9 Missing 2 Available in versions -, 01, 03, 04, 05, 06, 07, 08, 09, 10, 11, 12, 16 Vomiting no. of weeks if (vomit = 1 = Yes), Vomiting no. of weeks 226 2458 98 Unknown 99 Missing 1, Must be 00 if < 1 month]]> Diarrhoea Have you had any diarrhoea (loose or watery stools)? If yes, how many times a day? 2680 4 0 No 2540 1 Yes 138 8 Unknown 2 9 Missing 4 Available in versions -, 01, 03, 04, 05, 06, 07, 08, 09, 10, 11, 12, 16 Diarrhoea no. of weeks if (diarrhoea= 1 = Yes), Diarrhoea no. of weeks 138 2546 98 Unknown 99 Missing 1, Must be 00 if < 1 month]]> Diarrhoea times per day if (diarrhoea= 1 = Yes), how many times a day? 123 2561 98 Unknown 99 Missing 1]]> Diarrhoea blood if (diarrhoea= 1 = Yes), any blood present? 123 2561 0 No 98 1 Yes 18 8 Unknown 0 9 Missing 7 Sysmiss 2561 1]]> Abdominal pain Do you get abdominal pain? 1998 686 0 No 1624 1 Yes 372 8 Unknown 2 9 Missing 31 Sysmiss 655 Available in versions -,, 01, 03, 04, 09, 10, 11, 12 Abdominal pain location if (abdpain= 1 = Yes),Abdominal pain location 365 2319 1 Central 66 2 Epigastric 30 3 Generalised 138 4 Lower abdominal 85 5 LIF 12 6 LUQ 9 7 RIF 16 8 RUF 9 98 Unknown 0 99 Missing 7 Sysmiss 2312 1]]> Headaches Have you recently been getting severe headaches? 2678 6 0 No 2407 1 Yes 270 8 Unknown 1 9 Missing 6 Available in versions -, 01, 03, 04, 05, 06, 07, 08, 09, 10, 11, 12, 16 Neck stiffness If severe headaches, are they accompanied with neck stiffness (demonstrate this to client)? 258 2426 0 No 210 1 Yes 48 8 Unknown 0 9 Missing 12 Sysmiss 2414 1]]> Eye problems Have you had any problems with your vision? 2024 660 0 No 1865 1 Yes 158 8 Unknown 1 9 Missing 5 Sysmiss 655 Available in versions -,, 01, 03, 04, 09, 10, 11, 12 Eye problems in weeks Eye problems in weeks 158 2526 98 Unknown 99 Missing 1, Must be 00 if < 1 month]]> Eye problems in both eyes If problems with your vision, one or both eyes? 145 2539 1 One 30 2 Both 115 8 Unknown 0 9 Missing 13 Sysmiss 2526 1]]> Eye problems severity problems with your vision, How severe 143 2541 1 Blurred 117 2 Light but no features 19 3 No perception of light 7 8 Unknown 0 9 Missing 15 Sysmiss 2526 1]]> Parasthesia Is there any parasthesia? (altered sensation painful or painless in limbs) 2011 673 0 No 1635 1 Yes 375 8 Unknown 1 9 Missing 18 Sysmiss 655 Available in versions -,, 01, 03, 04, 09, 10, 11, 12 Parasthesia bilaterla/unilateral Parasthesia bilaterla/unilateral 332 2352 1 Bilateral 305 2 Unilateral 27 9 Missing 43 Sysmiss 2309 1]]> Weakness in limbs Is there any weakness of arms or legs 2007 677 0 No 1961 1 Yes 45 8 Unknown 1 9 Missing 22 Sysmiss 655 Available in versions -,, 01, 03, 04, 09, 10, 11, 12 Weakness in limbs weeks Weakness in limbs weeks 45 2639 98 Unknown 99 Missing 1, Must be 00 if < 1 month]]> Blisters Do you have painful small blisters on your mouth or genitals that took a long time to heal or came back repeatedly? 2022 662 0 No 1936 1 Yes 81 8 Unknown 5 9 Missing 7 Sysmiss 655 Available in versions -,, 01, 03, 04, 09, 10, 11, 12 Vaginal discharge Women only: Do you have an abnormal vaginal discharge? 1137 1547 0 No 1102 1 Foul 15 2 White 20 8 Unknown 0 9 Missing 17 Sysmiss 1530 Vaginal discharge in weeks If abnormal vaginal discharge(white or foul), for how long? 26 2658 98 Unknown 99 Missing 2 or 3, Must be 00 if < 1 month]]> Vaginal bleeding Women only: Is there any abnormal vaginal bleeding (intermenstrual, post-coital, post menopausal) If yes (white or foul), for how long? 1135 1549 0 No 1113 1 Yes 20 8 Unknown 2 9 Missing 19 Sysmiss 1530 Penis discharge If yes how long 839 1845 0 No 832 1 Yes 5 8 Unknown 2 9 Missing 36 Sysmiss 1809 Penis discharge in weeks Penis discharge in weeks 5 2679 1 1 2 1 8 1 12 1 98 Unknown 0 99 Missing 1 Sysmiss 2679 2 or 3, Must be 00 if < 1 month]]> Height Height 2171 513 998 Unknown 999 Missing Weight Weight 2171 513 998 Unknown 999 Missing Temperature Temperature 2171 513 98 Unknown 99 Missing Pulse Pulse 2152 532 998 Unknown 999 Missing BP systolic BP systolic 2171 513 998 Unknown 999 Missing BP diastolic BP diastolic 2171 513 998 Unknown 999 Missing Respiratory rate Respiratory rate 2137 547 10 1 11 1 12 8 14 40 15 7 16 251 17 106 18 374 19 152 20 226 21 103 22 178 23 51 24 193 25 12 26 98 27 15 28 57 29 18 30 52 31 12 32 31 33 2 34 24 36 33 37 2 38 10 39 2 40 32 41 1 42 4 43 1 44 10 45 2 46 5 48 4 50 2 52 2 53 1 54 1 56 1 60 4 62 1 64 1 68 1 72 1 83 1 84 1 98 1 124 1 998 Unknown 0 999 Missing 34 Sysmiss 513 MUAC MUAC 374 2310 998 Unknown 999 Missing Clubbing Are any of the following present? Clubbing 2165 519 0 No 2138 1 Yes 27 8 Unknown 0 9 Missing 10 Sysmiss 509 Available in versions -,, 01, 03, 04, 08, 09, 10, 11, 12, 16 Leuconychia Are any of the following present? Leuconychia 2022 662 0 No 2020 1 Yes 2 8 Unknown 0 9 Missing 7 Sysmiss 655 Available in versions -,, 01, 03, 04, 09, 10, 11, 12 Anaemia Are any of the following present? Anaemia 2160 524 0 No 2052 1 Yes 108 8 Unknown 0 9 Missing 15 Sysmiss 509 Available in versions -,, 01, 03, 04, 08, 09, 10, 11, 12, 16 Jaundice Are any of the following present? Jaundice 2162 522 0 No 2151 1 Yes 11 8 Unknown 0 9 Missing 13 Sysmiss 509 Available in versions -,, 01, 03, 04, 08, 09, 10, 11, 12, 16 Nail dystrophy Are any of the following present? Nail dystrophy 2020 664 0 No 1977 1 Yes 43 8 Unknown 0 9 Missing 9 Sysmiss 655 Available in versions -,, 01, 03, 04, 09, 10, 11, 12 Enlarged Lymph nodes Enlarged Lymph nodes Are there any enlarged Lymph nodes?s If yes, where (Left Right Bilateral) and typical size? 2677 7 0 No 2383 1 Yes 290 8 Unknown 4 9 Missing 7 Available in versions -, 01, 03, 04, 05, 06, 07, 08, 09, 10, 11, 12, 16 Inguinal If any enlarged Lymph nodes, where (Left Right Bilateral) and typical size? Inguinal 283 2401 0 No 200 1 Left 7 2 Right 5 3 Bilateral 71 8 Unknown 0 9 Missing 7 Sysmiss 2394 1]]> Inguinal If any enlarged Lymph nodes, where (Left Right Bilateral) and typical size? Inguinal cms 84 2600 998 Unknown 999 Missing 1/2/3]]> Submandibular If any enlarged Lymph nodes, where (Left Right Bilateral) and typical size? Submandibular 278 2406 0 No 178 1 Left 9 2 Right 17 3 Bilateral 74 8 Unknown 0 9 Missing 12 Sysmiss 2394 1]]> Submandibular cms If any enlarged Lymph nodes, where (Left Right Bilateral) and typical size? Submandibular cms 100 2584 998 Unknown 999 Missing 1/2/3]]> Epitrochlear If any enlarged Lymph nodes, where (Left Right Bilateral) and typical size?Epitrochlear 280 2404 0 No 214 1 Left 16 2 Right 11 3 Bilateral 39 8 Unknown 0 9 Missing 10 Sysmiss 2394 1]]> 66 2618 998 Unknown 999 Missing 1/2/3]]> Cervical If any enlarged Lymph nodes, where (Left Right Bilateral) and typical size? Cervical 278 2406 0 No 111 1 Left 25 2 Right 43 3 Bilateral 99 8 Unknown 0 9 Missing 12 Sysmiss 2394 1]]> 167 2517 998 Unknown 999 Missing 1/2/3]]> Axillary If any enlarged Lymph nodes, where (Left Right Bilateral) and typical size? Axillary 284 2400 0 No 150 1 Left 37 2 Right 23 3 Bilateral 74 8 Unknown 0 9 Missing 6 Sysmiss 2394 1]]> 135 2549 998 Unknown 999 Missing 1/2/3]]> the JVP elevated Is the JVP elevated? 2029 655 0 No 2014 1 Yes 15 8 Unknown 0 9 Missing 0 Sysmiss 655 Available in versions -,, 01, 03, 04, 09, 10, 11, 12 JVP height JVP elevated height 2 2682 98 Unknown 99 Missing 1]]> tamponade Is there any evidence of tamponade? 2029 655 0 No 1999 1 Yes 4 8 Unknown 0 9 Missing 26 Sysmiss 655 Available in versions -,, 01, 03, 04, 09, 10, 11, 12 Apex beat displaced Is the Apex beat displaced? if yes, comment below 2002 682 0 No 1999 1 Yes 3 8 Unknown 0 9 Missing 27 Sysmiss 655 Available in versions -,, 01, 03, 04, 09, 10, 11, 12 heart sounds normal Are the heart sounds normal? if no, comment below 2003 681 0 No 110 1 Yes 1893 8 Unknown 0 9 Missing 26 Sysmiss 655 Available in versions -,, 01, 03, 04, 09, 10, 11, 12 oedema Is there any oedema? 2028 656 0 No 1960 1 Yes 68 8 Unknown 0 9 Missing 1 Sysmiss 655 Available in versions -,, 01, 03, 04, 09, 10, 11, 12 oedema face If oedema where (Localised or Bilateral)? 61 2623 0 No 52 1 Localised 0 2 Bilateral 9 8 Unknown 0 9 Missing 7 Sysmiss 2616 1]]> oedema arms If oedema where (Localised or Bilateral)? 60 2624 0 No 55 1 Localised 1 2 Bilateral 4 8 Unknown 0 9 Missing 8 Sysmiss 2616 1]]> oedema legs If oedema where (Localised or Bilateral)? 68 2616 0 No 0 1 Localised 12 2 Bilateral 56 8 Unknown 0 9 Missing 0 Sysmiss 2616 1]]> oedema sacrum If oedema where (Localised or Bilateral)? 48 2636 0 No 46 1 Localised 0 2 Bilateral 2 8 Unknown 0 9 Missing 20 Sysmiss 2616 1]]> cardiovascular abnormalities Are there any other cardiovascular abnormalities? If yes Comment: 1917 767 0 No 1887 1 Yes 30 8 Unknown 0 9 Missing 112 Sysmiss 655 Available in versions -,, 01, 03, 04, 09, 10, 11, 12 trachea central Is the trachea central? 2028 656 1 Yes 2020 2 No deviated left 4 3 No deviated right 3 8 Unknown 1 9 Missing 1 Sysmiss 655 Available in versions -,, 01, 03, 04, 09, 10, 11, 12 expansion symmetrical Is expansion symmetrical? 2029 655 0 No 47 1 Yes 1979 8 Unknown 0 9 Missing 3 Sysmiss 655 Available in versions -,, 01, 03, 04, 09, 10, 11, 12 expansion reduced is it reduced on Left or Right? 43 2641 1 left 16 2 right 27 8 Unknown 0 9 Missing 4 Sysmiss 2637 0]]> percussion note symmetrical Is the percussion note symmetrical and resonant? 2023 661 0 No 164 1 Yes 1859 8 Unknown 0 9 Missing 6 Sysmiss 655 Available in versions -,, 01, 03, 04, 09, 10, 11, 12 percussion note dull percussion note dull 156 2528 1 Dull 113 2 Stony dull 43 8 Unknown 0 9 Missing 8 Sysmiss 2520 0]]> breaths sounds vesicular Are the breaths sounds vesicular? 2025 659 0 No 305 1 Yes 1720 8 Unknown 0 9 Missing 4 Sysmiss 655 Available in versions -,, 01, 03, 04, 09, 10, 11, 12 breaths sounds reduced 295 2389 1 Reduced 151 2 Broncial 144 8 Unknown 0 9 Missing 10 Sysmiss 2379 0]]> added sounds Are there added sounds? 2022 662 0 No 1556 1 Yes 466 8 Unknown 0 9 Missing 7 Sysmiss 655 Available in versions -,, 01, 03, 04, 09, 10, 11, 12 added sounds2 added sounds2 446 2238 1 Coarse crackles 156 2 Fine crackles 271 3 Wheeze 19 8 Unknown 0 9 Missing 20 Sysmiss 2218 1]]> added sounds location Localise the abnormality? 452 2232 0 No 0 1 Left 115 2 Right 140 3 Bilateral 197 8 Unknown 0 9 Missing 14 Sysmiss 2218 1]]> added sounds location2 added sounds location2 441 2243 1 Apex 68 2 Mid zone 163 3 Basal 208 4 Widespread 2 8 Unknown 0 9 Missing 25 Sysmiss 2218 1]]> abnormality in the mouth Is there any abnormality in the mouth? 2683 1 0 No 2545 1 Yes 137 8 Unknown 1 9 Missing 1 Available in versions -, 01, 03, 04, 05, 06, 07, 08, 09, 10, 11, 12, 16 Oral candidiasis If any abnormality in the mouth, Oral candidiasis 133 2551 0 No 51 1 Yes 82 8 Unknown 0 9 Missing 4 Sysmiss 2547 1 ; If Abnormality in the mouth =1, then this variable Must be 1 ; Must be blank if Abnormality in the mouth <> 1]]> Kaposi’s sarcoma any abnormality in the mouth, Kaposi's sarcoma 133 2551 0 No 122 1 Yes 11 8 Unknown 0 9 Missing 4 Sysmiss 2547 1 ; If Abnormality in the mouth =1, then this variable Must be 1 ; Must be blank if Abnormality in the mouth <> 1]]> Ulceration any abnormality in the mouth, Ulceration 133 2551 0 No 88 1 Yes 45 8 Unknown 0 9 Missing 4 Sysmiss 2547 1 ; If Abnormality in the mouth =1, then this variable Must be 1 ; Must be blank if Abnormality in the mouth <> 1]]> Mouth Other any abnormality in the mouth, Mouth Other 129 2555 0 No 115 1 Yes 14 8 Unknown 0 9 Missing 8 Sysmiss 2547 1 ; If Abnormality in the mouth =1, then this variable Must be 1 ; Must be blank if Abnormality in the mouth <> 1]]> hepatomegaly Is there hepatomegaly? (distance below Right costal margin) 2028 656 0 No 1985 1 Yes 42 8 Unknown 1 9 Missing 1 Sysmiss 655 Available in versions -,, 01, 03, 04, 09, 10, 11, 12 hepatomegaly cms hepatomegaly cms 42 2642 Available in versions -,, 01, 03, 04 splenomegaly Is there splenomegaly? (distance below Left costal margin) 2028 656 0 No 1972 1 Yes 55 8 Unknown 1 9 Missing 1 Sysmiss 655 Available in versions -,, 01, 03, 04, 09, 10, 11, 12 splenomegaly cms splenomegaly cms 55 2629 Available in versions -,, 01, 03, 04 kidney enlargement Is there kidney enlargement? 2021 663 0 No 2019 1 Left 0 2 Right 1 3 Bilateral 1 8 Unknown 0 9 Missing 8 Sysmiss 655 Available in versions -,, 01, 03, 04, 09, 10, 11, 12 other abdominal abnormality Is there any other abdominal abnormality? 2005 679 0 No 1850 1 Yes 155 8 Unknown 0 9 Missing 24 Sysmiss 655 Available in versions -,, 01, 03, 04, 09, 10, 11, 12 other abdominal abnormality tenderness other abdominal abnormality tenderness 147 2537 0 No 56 1 Yes 91 8 Unknown 0 9 Missing 8 Sysmiss 2529 1]]> other abdominal abnormality guarding other abdominal abnormality guarding 139 2545 0 No 104 1 Yes 35 8 Unknown 0 9 Missing 16 Sysmiss 2529 1]]> other abdominal abnormality other mass other abdominal abnormality other mass 141 2543 0 No 106 1 Yes 34 8 Unknown 1 9 Missing 14 Sysmiss 2529 1]]> other abdominal abnormality distension other abdominal abnormality distension 139 2545 0 No 96 1 Yes 43 8 Unknown 0 9 Missing 16 Sysmiss 2529 1]]> other abdominal abnormality other other abdominal abnormality other 141 2543 0 No 79 1 Yes 62 8 Unknown 0 9 Missing 14 Sysmiss 2529 1]]> alteration to conscious level Is there any alteration to conscious level? If yes Glasgow Coma Score 2017 667 0 No 1985 1 Yes 32 8 Unknown 0 9 Missing 12 Sysmiss 655 Available in versions -,, 01, 03, 04, 09, 10, 11, 12 Glasgow coma score If any alteration to conscious level Glasgow coma score 32 2652 98 Unknown 99 Missing 1]]> neck stiffness Is there any neck stiffness? 2019 665 0 No 1980 1 Yes 39 8 Unknown 0 9 Missing 10 Sysmiss 655 Available in versions -,, 01, 03, 04, 09, 10, 11, 12 any other neurological abnormality Is there any other neurological abnormality? 2021 663 0 No 2015 1 Yes 6 8 Unknown 0 9 Missing 8 Sysmiss 655 Available in versions -,, 01, 03, 04, 09, 10, 11, 12 limb paralysis Is there any limb paralysis ? 6 2678 0 No 1 1 Quadraplegia 0 2 Paraplegia 3 3 Hemiplegia 1 4 Arm 0 5 Leg 1 6 Hand 0 7 Foot 0 98 Unknown 0 99 Missing 0 Sysmiss 2678 1]]> limb paralysis location limb paralysis location 1 2683 1 left 1 2 right 0 8 Unknown 0 9 Missing 0 Sysmiss 2683 1, Must be blank unless paralysis is 5, 6, 7 or 8 or 4]]> cranial nerve palsy Is there any cranial nerve palsy? No. cranial nerves involved 5 2679 0 3 1 2 8 Unknown 0 9 Missing 1 Sysmiss 2678 1]]> sensory loss Is there any sensory loss? 5 2679 0 No 3 1 Spinal level 2 2 Dermatomal 0 3 Stocking 0 4 Mononeuritis 0 8 Unknown 0 9 Missing 1 Sysmiss 2678 1]]> the gait normal Is the gait normal? 2015 669 1 Yes 1947 2 Unable to walk 43 3 Spastic 2 4 Ataxic 10 5 other 13 9 Missing 14 Sysmiss 655 Available in versions -,, 01, 03, 04, 09, 10, 11, 12 abnormality of the eye On external examination of the eye is there any abnormality? If yes, is there any of the following? 2027 657 0 No 1973 1 Yes 54 8 Unknown 0 9 Missing 2 Sysmiss 655 Available in versions -,, 01, 03, 04, 09, 10, 11, 12 Conjuncivitis If eye any abnormality, is there any of the following: Conjuncivitis 50 2634 0 No 37 1 Yes 13 8 Unknown 0 9 Missing 4 Sysmiss 2630 1]]> Uveitis If eye any abnormality, is there any of the following: Uveitis 47 2637 0 No 44 1 Yes 3 8 Unknown 0 9 Missing 7 Sysmiss 2630 1]]> Pterygium If eye any abnormality, is there any of the following: Pterygium 47 2637 0 No 31 1 Yes 16 8 Unknown 0 9 Missing 7 Sysmiss 2630 1]]> Entropion If eye any abnormality, is there any of the following: Entropion 47 2637 0 No 46 1 Yes 1 8 Unknown 0 9 Missing 7 Sysmiss 2630 1]]> Other eye abnormality Other eye abnormality If eye any abnormality, is there any of the following: Other eye abnormality 51 2633 0 No 27 1 Yes 24 8 Unknown 0 9 Missing 3 Sysmiss 2630 1]]> fundoscopy been performed Has fundoscopy been performed? 2029 655 0 No 2026 1 Yes 3 8 Unknown 0 9 Missing 0 Sysmiss 655 Available in versions -,, 01, 03, 04, 09, 10, 11, 12 fundoscopy abnormality If fundoscopy been performed, are there any abnormalities? 1 2683 0 No 0 1 Yes 1 8 Unknown 0 9 Missing 2 Sysmiss 2681 1]]> genitourinary system been examined Has the genitourinary system been examined? Request if GU symptoms other than ulcers or white discharge. 2029 655 0 No 1969 1 Yes 60 8 Unknown 0 9 Missing 0 Sysmiss 655 Available in versions -,, 01, 03, 04, 09, 10, 11, 12 Cervical mass 31 2653 0 No 31 1 Yes 0 8 Unknown 0 9 Missing 3 Sysmiss 2650 1]]> Vulval mass 31 2653 0 No 31 1 Yes 0 8 Unknown 0 9 Missing 3 Sysmiss 2650 1]]> Warts Is there any of the following abnormalities? Warts 60 2624 0 No 50 1 Yes 5 8 Unknown 0 9 Missing 5 Sysmiss 2624 1]]> Ulceration 55 2629 0 No 48 1 Yes 7 8 Unknown 0 9 Missing 5 Sysmiss 2624 1]]> Other genitourinary abnormality 56 2628 0 No 24 1 Yes 32 8 Unknown 0 9 Missing 4 Sysmiss 2624 1]]> Locomotor exam v2 onwards Is there any locomotor abnormality 1464 1220 0 No 1454 1 Yes 10 8 Unknown 0 9 Missing 0 Sysmiss 1220 Locomotor gibbus v2 onwards Is there any of the following abnormalities? Locomotor gibbus 10 2674 0 No 6 1 Yes 4 8 Unknown 0 9 Missing 0 Sysmiss 2674 1, Must be blank if version = 01]]> Locomotor arthtritis v2 onwards Is there any of the following abnormalities? Locomotor arthtritis 10 2674 0 No 8 1 Yes 2 8 Unknown 0 9 Missing 0 Sysmiss 2674 1]]> Locomotor other v2 onwards Is there any of the following abnormalities? Locomotor other 9 2675 0 No 5 1 Yes 4 8 Unknown 0 9 Missing 1 Sysmiss 2674 1]]> Section 4 date Section 4 interview date 1462 =18/06/2007 and <= current date or blank, >= Section 1 interview date]]> Section 4 recorder Section 4 recorder 1462 0 Section 4 place Place of interview 1460 1224 1 Home 480 2 KDH 828 3 CRH 129 4 Other (specify) 23 8 Unknown 0 9 Missing 0 Sysmiss 1224 Available in versions -,, 01, 03, 04, 09 Section 5 date 1975 01- 04, >= TBI interview date and <= current date or blank]]> Section 5 recorder Staff code 1975 0 01- 04]]> Client seems fit and healthy Client not acutely unwell and no evidence of latent TB infection 1975 709 0 No 1235 1 Yes 740 8 Unknown 0 9 Missing 0 Sysmiss 709 Available in versions -,, 01, 03, 04, 05, 06, 07 Latent TB infection Latent TB infection (TST=10mm in HIV -ve, =5mm in HIV +ve) 1888 796 0 No 1421 1 Yes 467 8 Unknown 0 9 Missing 87 Sysmiss 709 Available in versions -,, 01, 03, 04, 05, 06, 07 Pulmonary TB case Pulmonary TB case 1589 1095 0 No 1128 1 Yes 461 8 Unknown 0 9 Missing 0 Sysmiss 1095 Available in versions -,, 01, 03, 04 Extra pulmonary TB case Extra pulmonary TB case 1589 1095 0 No 1493 1 Yes 96 8 Unknown 0 9 Missing 0 Sysmiss 1095 Available in versions -,, 01, 03, 04 Other illness not TB Other illness not TB definite diagnosis 1589 1095 0 No 1444 1 Yes 145 8 Unknown 0 9 Missing 0 Sysmiss 1095 Available in versions -,, 01, 03, 04 Other illness not TB: NO definite diagnosis Other illness not TB: NO definite diagnosis 1589 1095 0 No 1456 1 Yes 133 8 Unknown 0 9 Missing 0 Sysmiss 1095 Available in versions -,, 01, 03, 04 DEO Coder DEO Coder 2684 0 Available in versions -, 01, 03, 04, 05, 06, 07, 08, 09, 10, 11, 12, 16 Checker Checker 2684 0 Available in versions -, 01, 03, 04, 05, 06, 07, 08, 09, 10, 11, 12, 16 DEO version DEO version 507 2177 DEO Form completion date 507 Available in versions -,, 01, 03, 04, 09, 10, 11, 12 DEO staffcode DEO staffcode 507 0 Available in versions -,, 01, 03, 04, 09, 10, 11, 12 DEO Status Status of patient at date of TBI-DEO 507 2177 1 Alive 402 2 Dead 44 3 Left 0 4 Missed 0 8 Unknown 61 9 Missing 0 Sysmiss 2177 Available in versions -,, 01, 03, 04, 09, 10, 11, 12 DEO Death left date 44 Available in versions -,, 01, 03, 04, 09, 10, 12 DEO Death left date incomplete DEO Death left date incomplete 3 2681 1 Full date known 0 2 Day unknown 3 3 Month unknown 0 4 Day and month unknown 0 8 Not known at all 0 9 Missing 0 Sysmiss 2681 Available in versions -,, 04, 10 DEO Disease episode outcome DEO Disease episode outcome 507 2177 0 Uncertain Pathology 316 1 Definitive Diagnosis 191 8 Unknown 0 9 Missing 0 Sysmiss 2177 Available in versions -,, 01, 03, 04, 09, 10, 11, 12 DEO definitive diagnosis DEO definitive diagnosis 234 2450 1 TB 80 2 Other 154 8 Unknown 0 9 Missing 13 Sysmiss 2437 Available in versions -,, 01, 03, 04, 09, 10, 11, 12 DEO Section 2 date 507 Available in versions -,, 01, 03, 04, 09, 10, 11, 12 DEO Section 2 recorder DEO Section 2 recorder 507 0 Available in versions -,, 01, 03, 04, 09, 10, 11, 12 DEO Section 2 interview place DEO Section 2 interview place 223 2461 1 Home 3 2 KDH 220 3 CRH 0 4 Other (specify) 0 8 Unknown 0 9 Missing 0 Sysmiss 2461 Available in versions -,, 01, 04, 09, 10, 11, 12 DEO Section 3 interview date 223 Available in versions -,, 01, 04, 09, 10, 11, 12 DEO Section 2 recorder DEO Section 2 recorder 223 0 Available in versions -,, 01, 04, 09, 10, 11, 12 Final Diagnosis1 only filled in TBI version 1 then entered from DEO Outcome of illness assessment Final Diagnosis1 517 0 1 or other illness no definite diagnosis <> 1, Must be blank if version >= 02]]> Final Diagnosis2 only filled in TBI version 1 then entered from DEO Outcome of illness assessment Final Diagnosis2 79 0 1 or other illness no definite diagnosis <> 1, Must be blank if version >= 02]]> Final Diagnosis3 only filled in TBI version 1 then entered from DEO Outcome of illness assessment Final Diagnosis3 8 0 1 or other illness no definite diagnosis <> 1, Must be blank if version >= 02]]> Final Diagnosis4 only filled in TBI version 1 then entered from DEO Outcome of illness assessment Final Diagnosis4 1 0 1 or other illness no definite diagnosis <> 1, Must be blank if version >= 02]]> Final Diagnosis5 only filled in TBI version 1 then entered from DEO Outcome of illness assessment Final Diagnosis5 0 0 1 or other illness no definite diagnosis <> 1, Must be blank if version >= 02]]> DEO Lab confirmed Confirmed by laboratory 507 2177 0 No 406 1 Yes 55 2 TB 46 8 Unknown 0 9 Missing 0 Sysmiss 2177 Available in versions -,, 01, 03, 04, 09, 10, 11, 12 DEO OLDSPECSET 1 DEO OLDSPECSET 1 55 2629 1 Ascitic fluid 0 2 Biopsy (not lymph-node or skin) 0 3 CSF 0 4 Induced sputum 0 5 Pericardial effusion 0 6 Lymph-node biopsy fre 0 7 In formal saline 0 8 Skin biopsy 20 10 Lymph node biopsy 13 11 Needle aspirate 0 12 Pleural fluid 1 13 Sputum 0 14 Smear for H.E. 0 15 Pus 0 16 Needle washing (FNA) 0 17 Lymph node smear 0 18 Smear for ZN (FNA) 1 19 Fluid including CSF 20 98 Unknown 0 99 Missing 0 9 Joint effusion 0 Sysmiss 2629 Available in versions -,, 01, 03, 04, 09 DEO Labno 1 DEO Labno 1 55 0 Available in versions -,, 01, 03, 04, 09 DEO OLDSPECSET 2 DEO OLDSPECSET 2 1 2683 1 Ascitic fluid 0 2 Biopsy (not lymph-node or skin) 0 3 CSF 0 4 Induced sputum 0 5 Pericardial effusion 0 6 Lymph-node biopsy fre 0 7 In formal saline 0 8 Skin biopsy 0 10 Lymph node biopsy 0 11 Needle aspirate 0 12 Pleural fluid 1 13 Sputum 0 14 Smear for H.E. 0 15 Pus 0 16 Needle washing (FNA) 0 17 Lymph node smear 0 18 Smear for ZN (FNA) 0 19 Fluid including CSF 0 98 Unknown 0 99 Missing 0 9 Joint effusion 0 Sysmiss 2683 Available in versions -,, 04 DEO Labno 2 DEO Labno 2 1 0 Available in versions -,, 04 Reviewed by study leader date 507 2008-11-26 2014-02-03 Available in versions -,, 01, 03, 04, 09, 10, 11, 12 DEO Reviewer staffcode Reviewed by study leader staffcode 507 0 Available in versions -,, 01, 03, 04, 09, 10, 11, 12 DEO Checker DEO level1 Checker 507 0 Available in versions -,, 01, 03, 04, 09, 10, 11, 12 Coder Coder 507 0 Available in versions -,, 01, 03, 04, 09, 10, 11, 12 entry by entry by 2682 0 Available in versions -, 01, 03, 04, 05, 06, 07, 08, 09, 10, 11, 12, 16 update by update by 1241 0 Available in versions -, 01, 03, 04, 05, 06, 07, 08, 09, 10, 11, 12, 16 entry date entry date 2682 2007-08-15 2014-08-04 Available in versions -, 01, 03, 04, 05, 06, 07, 08, 09, 10, 11, 12, 16 update date update date 1241 Available in versions -, 01, 03, 04, 05, 06, 07, 08, 09, 10, 11, 12, 16 verified verified 2684 0 0 No 0 1 Yes 2684 8 Unknown 0 9 Missing 0 Available in versions -, 01, 03, 04, 05, 06, 07, 08, 09, 10, 11, 12, 16 Study identifier in Karonga and Lilongwe Study identifier 578 0 Contact number in Karonga and Lilongwe Contact number 578 0 Form version Form version 578 0 range 1:2 Old TB study number Old TB study number 288 0 Main Unique Identifier in Karonga Ident 578 0 Visit Visit 578 0 0 baseline 145 1 1 month 30 2 Second visit 6 3 6 month visit 302 4 18 month visit 72 5 24 months visit 23 6 Progressor 0 8 Unknown 0 9 Missing 0 Available in versions -, 01, 02, 03 Original Identifier in Karonga Origid 578 0 Form completion date Form completion date 578 = 01/10/2008 and < = current date]]> Recorder Staff code 1 578 0 Available in versions -, 01, 02, 03 Filled for TSD Is TBID filled forTSD study 105 473 0 No 1 1 Yes 104 8 Unknown 0 9 Missing 0 Sysmiss 473 Filled for LIS Is TBID filled for LIS study 105 473 0 No 104 1 Yes 1 8 Unknown 0 9 Missing 0 Sysmiss 473 Informant Informant 578 0 0 None 26 1 Individual 341 2 Spouse 45 3 Other relative 95 4 Neighbour 32 5 Friend 11 6 Other 28 8 Unknown 0 9 Missing 0 Available in versions -, 01, 02, 03 Status Status of patient 578 0 1 Died 107 2 End of study 271 3 Ineligible 63 4 Left 80 5 Missed 9 6 Refused 48 8 Unknown 0 9 Missing 0 Available in versions -, 01, 02, 03 Death/left date Date of death or departure 193 Available in versions -, 01, 02, 03 Death/left date incomplete Death/left date incomplete 59 519 1 Full date known 0 2 Day unknown 57 3 Month unknown 0 4 Day and month unknown 2 8 Not known at all 0 9 Missing 0 Sysmiss 519 1;]]> New village New village 86 0 2]]> Specimens already collected Timing of refusal/default: Specimens already collected 126 452 0 No 100 1 Yes 26 8 Unknown 0 9 Missing 115 Sysmiss 337 Available in versions -, 01, 02, 03 Skintest set Timing of refusal/default skin test already set 115 463 0 No 111 1 Yes 4 8 Unknown 0 9 Missing 126 Sysmiss 337 Available in versions -, 01, 02, 03 Skintest read Timing of refusal/default skin test already read 109 469 0 No 106 1 Yes 3 8 Unknown 0 9 Missing 132 Sysmiss 337 Available in versions -, 01, 02, 03 Sick Reason refused: Sick 36 542 0 No 34 1 Yes 2 8 Unknown 0 9 Missing 19 Sysmiss 523 3]]> Not interested Reason refused: Not interested to continue 39 539 0 No 8 1 Yes 31 8 Unknown 0 9 Missing 16 Sysmiss 523 3]]> Other Reason refused: Other (please specify) 33 545 0 No 27 1 Yes 6 8 Unknown 0 9 Missing 22 Sysmiss 523 3]]> coder coder 578 0 Available in versions -, 01, 02, 03 checker checker 578 0 Available in versions -, 01, 02, 03 Entry by Entry by 578 0 Available in versions -, 01, 02, 03 Update by Update by 38 0 Available in versions -, 01, 02, 03 Entry date Entry date 578 Available in versions -, 01, 02, 03 Update date Update date 38 Available in versions -, 01, 02, 03 Verified Verified 577 1 0 No 0 1 Yes 577 8 Unknown 0 9 Missing 0 Sysmiss 1 Available in versions -, 01, 02, 03