ves DDI-MWI-MEIRU-Vaccine surveillance (VESE)-2011-v1 Chifundo Kanjala Elizabeth Munthali Estelle McLean 2020-05-07 Nesstar Publisher Version 1 (May 2020) ves VES Vaccine Surveillance 2011 - 2015 English MWI-MEIRU-VES-2011-v1 Nigel A Cunliffe Robert S Heyderman Neil French

MEIRU Core datamanagement team

Anthony Costello Charles Mwansambo Mrs Agnes Katsulukuta Andrew Gonani Jacqueline Tate Umesh Parashar Cynthia Whitney Osamu Nakagomi 2016-11-14 Nesstar Publisher Wellcome Trust, UK WT091909 Demographic Surveillance Pneumococcal Infections Pneumococcal Conjugate Vaccine Malawi Matched Case-Control Studies Malawi Individual Children <5 years of age in the DSS area. Observational episodes Vaccine surveillance, Vital signs, Vaccine history, Presenting History, Past medical history, Examination, Diagnosis, Investigations Malawi Epidemiology and Intervention Research Unit Face-to-face [f2f] Chilumba Malawi Epidemiology and Intervention Research Unit ves_clinicvac.NSDstat 258 57 Nesstar 200801 Malawi Epidemiology and Interventions Research Unit ves_vese.NSDstat 7640 180 Nesstar 200801 Malawi Epidemiology and Interventions Research Unit ves_vesi.NSDstat 7640 29 Nesstar 200801 Malawi Epidemiology and Interventions Research Unit VESE VESI ves_clinicvac Identity Vital signs Vacine history Presenting History Past medical history Examination Diagnosis Investigations To be completed upo discharge Others Identifier Identifiers Vaccine history Others Additional Identifiers Consent Others Main Unique Identifier in Karonga Ident 258 0 Original Identifier in Karonga Ident 258 0 Clinic Vaccination registration Number Clinic Vaccination registration Number 258 0 BCG given BCG given 141 117 0 No 0 1 Yes 141 8 Unknown 0 9 Missing 117 BCG date Vaccine History BCG date 141 2009-06-16 2013-10-25 BCGdate date est BCGdate date est 0 258 1 Full date known 0 2 Day unknown 0 3 Month unknown 0 4 Day and month unknown 0 8 Not known at all 0 9 Missing 0 Sysmiss 258 Polio0 given Polio0 given 103 155 0 No 0 1 Yes 103 8 Unknown 0 9 Missing 155 Polio0 date Vaccine History Polio0 date 103 2009-06-16 2013-09-18 P0DATE date est P0DATE date est 0 258 1 Full date known 0 2 Day unknown 0 3 Month unknown 0 4 Day and month unknown 0 8 Not known at all 0 9 Missing 0 Sysmiss 258 Vaccination Health centre 0 Vaccination Health centre 0 142 0 Penta 1 given Penta 1 given 123 135 0 No 0 1 Yes 123 8 Unknown 0 9 Missing 135 Penta 1 date Penta 1 date 123 2007-04-16 2013-08-06 DPTHH1DATE date est DPTHH1DATE date est 0 258 1 Full date known 0 2 Day unknown 0 3 Month unknown 0 4 Day and month unknown 0 8 Not known at all 0 9 Missing 0 Sysmiss 258 Polio 1 given Polio 1 given 121 137 0 No 0 1 Yes 121 8 Unknown 0 9 Missing 137 Polio 1 date Polio 1 date 121 2007-04-16 2013-08-06 P1DATE date est P1DATE date est 0 258 1 Full date known 0 2 Day unknown 0 3 Month unknown 0 4 Day and month unknown 0 8 Not known at all 0 9 Missing 0 Sysmiss 258 PCV1 given PCV1 given 112 146 0 No 0 1 Yes 112 8 Unknown 0 9 Missing 146 PCV1 date PCV1 date 112 2011-06-21 2013-08-06 PCV1DATE date est PCV1DATE date est 0 258 1 Full date known 0 2 Day unknown 0 3 Month unknown 0 4 Day and month unknown 0 8 Not known at all 0 9 Missing 0 Sysmiss 258 RV1 given RV1 given 50 208 0 No 0 1 Yes 50 8 Unknown 0 9 Missing 208 RV1 date RV1 date 50 2012-11-15 2013-08-06 RV1DATE date est RV1DATE date est 0 258 1 Full date known 0 2 Day unknown 0 3 Month unknown 0 4 Day and month unknown 0 8 Not known at all 0 9 Missing 0 Sysmiss 258 Vaccination Health centre 1 Vaccination Health centre 1 127 0 Penta 2 given Penta 2 given 97 161 0 No 0 1 Yes 97 8 Unknown 0 9 Missing 161 Penta 2 date Penta 2 date 97 2009-05-13 2013-08-27 RV1DATE date est RV1DATE date est 0 258 1 Full date known 0 2 Day unknown 0 3 Month unknown 0 4 Day and month unknown 0 8 Not known at all 0 9 Missing 0 Sysmiss 258 Polio 2 given Polio 2 given 95 163 0 No 0 1 Yes 95 8 Unknown 0 9 Missing 163 Polio 2 date Polio 2 date 95 2009-05-13 2013-08-20 P2DATE date est P2DATE date est 0 258 1 Full date known 0 2 Day unknown 0 3 Month unknown 0 4 Day and month unknown 0 8 Not known at all 0 9 Missing 0 Sysmiss 258 PCV2 given PCV2 given 83 175 0 No 0 1 Yes 83 8 Unknown 0 9 Missing 175 PCV2 date PCV2 date 83 2011-08-16 2013-08-27 PCV2DATE date est PCV2DATE date est 0 258 1 Full date known 0 2 Day unknown 0 3 Month unknown 0 4 Day and month unknown 0 8 Not known at all 0 9 Missing 0 Sysmiss 258 RV2 given RV2 given 27 231 0 No 0 1 Yes 27 8 Unknown 0 9 Missing 231 RV2 date RV2 date 26 2012-11-15 2013-08-20 RV2DATE date est RV2DATE date est 0 258 1 Full date known 0 2 Day unknown 0 3 Month unknown 0 4 Day and month unknown 0 8 Not known at all 0 9 Missing 0 Sysmiss 258 Vaccination Health centre 2 Vaccination Health centre 2 101 0 Penta 3 given Penta 3 given 60 198 0 No 0 1 Yes 60 8 Unknown 0 9 Missing 198 Penta 3 date Penta 3 date 59 2011-08-16 2013-08-27 DPTHH3DATE date est DPTHH3DATE date est 0 258 1 Full date known 0 2 Day unknown 0 3 Month unknown 0 4 Day and month unknown 0 8 Not known at all 0 9 Missing 0 Sysmiss 258 Polio 3 given Polio 3 given 47 211 0 No 0 1 Yes 47 8 Unknown 0 9 Missing 211 Polio 3 date Polio 3 date 45 2011-08-16 2013-08-27 P3DATE date est P3DATE date est 0 258 1 Full date known 0 2 Day unknown 0 3 Month unknown 0 4 Day and month unknown 0 8 Not known at all 0 9 Missing 0 Sysmiss 258 PCV3 given PCV3 given 57 201 0 No 0 1 Yes 57 8 Unknown 0 9 Missing 201 PCV3 date PCV3 date 57 2011-09-20 2013-11-22 PCV3DATE date est PCV3DATE date est 0 258 1 Full date known 0 2 Day unknown 0 3 Month unknown 0 4 Day and month unknown 0 8 Not known at all 0 9 Missing 0 Sysmiss 258 Vaccination Health centre 3 Vaccination Health centre 3 65 0 Measles given Measles given 14 244 0 No 0 1 Yes 14 8 Unknown 0 9 Missing 244 Measles date Measles date 14 2011-09-20 2013-09-24 MEASDATE date est MEASDATE date est 0 258 1 Full date known 0 2 Day unknown 0 3 Month unknown 0 4 Day and month unknown 0 8 Not known at all 0 9 Missing 0 Sysmiss 258 Measles vaccination Health centre Measles vaccination Health centre 14 0 Date checked clinic Date checked clinic 258 2013-08-05 2013-11-27 Staff code of record checker Staff code of record checker 258 0 Entry date Entry date 258 2014-01-14 2014-02-11 Entered by staff code Entered by staff code 258 0 Update date Update date 132 2014-01-20 2014-02-28 Updated by staff code Updated by staff code 132 0 Verified flag Verified flag 258 0 0 No 0 1 Yes 258 8 Unknown 0 9 Missing 0 Version Version 7640 0 Consent date Consultation date 7640 2011-08-22 2015-11-30 Admission date Admission date 94 2011-10-04 2015-10-04 Study identifier Study identifier 7640 0 Contact number Contact number 7640 0 Match number Match number 0 0 Weight Vital signs Weight 7640 0 0 19.8 10.005 Length Vital signs Length 7640 0 0 150 76.161 MUAC Vital signs MUAC 7634 6 998 Unknown 999 Missing Pulse Vital signs Pulse 7640 0 Temperature Vital signs Temperature 7640 0 0 42 37.83 Respiratory rate Vital signs Respiratory rate 7640 0 20 144 52.095 SaO in air Vital signs Sats 6529 1111 998 Unknown 999 Missing Fevers Presenting History Fever 7640 0 0 No 666 1 Yes 6972 8 Unknown 2 9 Missing 0 Fever duration If Yes (Fever) Fever, How long for (days) 6946 694 98 Unknown 99 Missing Cough Presenting History Cough 7640 0 0 No 2205 1 Yes 5433 8 Unknown 2 9 Missing 0 Cough duration If Yes (Cough) Cough, How long for (days) 5381 2259 98 Unknown 99 Missing Difficulty breathing Presenting History Difficulty breathing 7640 0 0 No 7023 1 Yes 611 8 Unknown 6 9 Missing 0 Difficulty breathing duration If Yes (Difficulty breathing) Difficulty breathing, How long for (days) 603 7037 98 Unknown 99 Missing Stopped breathing Presenting History Stopped breathing 7640 0 0 No 7632 1 Yes 0 8 Unknown 8 9 Missing 0 Stopped breathing duration If Yes (Stopped breathing) Stopped breathing, How long for (days) 0 7640 8 Unknown 0 9 Missing 0 Sysmiss 7640 Vomiting Presenting History Vomiting 7640 0 0 No 5352 1 Yes 2287 8 Unknown 1 9 Missing 0 Vomiting duration If Yes (Vomiting) Vomiting, How long for 2276 5364 98 Unknown 99 Missing Vomiting max If Yes (Vomiting) Vomiting, Maximum number per day 2200 5440 1 1 time 429 2 2-4 times 1644 3 >=5 times 127 8 Unknown 0 9 Missing 87 Sysmiss 5353 Diarrhoea Presenting History Diarrhoea 7640 0 0 No 6124 1 Yes 1514 8 Unknown 2 9 Missing 0 Diarrhoea duration If Yes (Diarrhoea) Diarrhoea, How long for 1493 6147 98 Unknown 99 Missing Diarrhoea max If Yes (Diarrhoea) Diarrhoea, Maximum number per day 1480 6160 1 1 time 345 2 4-5 times 984 3 >=6 times 151 8 Unknown 0 9 Missing 34 Sysmiss 6126 Convulsions Presenting History Convulsions 7640 0 0 No 7521 1 Yes 116 8 Unknown 3 9 Missing 0 Convulsions – last time If Yes (Convulsions) Convulsions, When was last one(hrs ago) 116 7524 98 Unknown 99 Missing Convulsions how many If Yes (Convulsions) Convulsions, How many 116 7524 98 Unknown 99 Missing Rash Presenting History Rash 7640 0 0 No 7496 1 Yes 140 8 Unknown 4 9 Missing 0 Rash duration If Yes (Rash) Rash, How long for 131 7509 98 Unknown 99 Missing Oedema Presenting History Oedema 7640 0 0 No 7618 1 Yes 12 8 Unknown 10 9 Missing 0 Oedema duration If Yes (Oedema) Oedema, How long for 10 7630 98 Unknown 99 Missing Thirst Presenting History Thirst/sucking 7640 0 1 Drank normally 7195 2 Thirsty, drank eagerly 245 3 Drank poorly or unable 32 8 Unknown 168 9 Missing 0 Thirst duration Presenting History How many days has your child been thirsty/drinking poorly? 232 7408 98 Unknown 99 Missing Other symptoms Presenting History Other symptoms If Yes specify 7631 9 0 No 5746 1 Yes 1885 8 Unknown 0 9 Missing 9 Other symptoms details If yes (Other symptoms) specify 1885 0 Prior antibiotic use Presenting History Prior antibiotic use during this illness 7640 0 0 No 6999 1 Yes 634 8 Unknown 7 9 Missing 0 Antibiotic days If Yes (Prior antibiotic use during this illness) Antibiotics, How long ago (days) 560 7080 8 Unknown 9 Missing SP use Presenting History SP (Fansidar) use during this illness 7640 0 0 No 7568 1 Yes 65 8 Unknown 7 9 Missing 0 SP days If Yes (SP (Fansidar) use during this illness) SP (Fansidar), How long ago (days) 63 7577 8 Unknown 9 Missing ORS use Presenting History ORS use during this illness prior to hospital 7640 0 0 No 7414 1 Yes 214 8 Unknown 12 9 Missing 0 ORS days If Yes (ORS use during this illness prior to hospital) ORS, How long ago (days) 206 7434 98 Unknown 99 Missing Born premature Past Medical History Was your child born on time or premature? 7632 8 0 Normal 7544 1 Premature 77 8 Unknown 11 9 Missing 8 Birth weight Past Medical History What was your child's birth weight? 7640 0 0 6 2.542 Ever breastfed Past Medical History Has your child ever been breastfed? If N/Don't know skip to Q36(Since birth, how many times did your child have to stay overnight in hospital?) 7635 5 0 No 30 1 Yes 7605 8 Unknown 0 9 Missing 5 Currently breastfed Past Medical History Is your child currently breastfed? If N/Don't know skip to Q36(Since birth, how many times did your child have to stay overnight in hospital?) 7600 40 0 No 2547 1 Yes 5053 8 Unknown 0 9 Missing 5 Sysmiss 35 Other food Past Medical History Does your child receive any other food apart from breastfeeding? 5075 2565 0 No 907 1 Yes 4168 8 Unknown 0 9 Missing 2530 Sysmiss 35 Times in hospital Since birth, how many times did your child have to stay overnight in hospital? If 0 skip to Q39 (In the last 3 months, how many times did your child visit a health centre for a reason other than vaccination?) 7625 15 0 0 4113 1 1-2 2604 2 3-5 815 3 6-10 75 4 >10 10 8 Unknown 8 9 Missing 15 Hospital because of diarrhoea Since birth, did your child have to stay overnight in hospital due to diarrhoea? 3468 4172 0 No 2935 1 Yes 531 8 Unknown 2 9 Missing 57 Sysmiss 4115 Hospital because of cough Since birth, did your child have to stay overnight in hospital due to cough or difficulty breathing? 3464 4176 0 No 1649 1 Yes 1812 8 Unknown 3 9 Missing 61 Sysmiss 4115 Visit health centre Times visited health centre 2191 5449 0 0 1490 1 1-2 665 2 3-5 36 3 6-10 0 4 >10 0 8 Unknown 0 9 Missing 5 Sysmiss 5444 Visit health centre in last 3 months Past Medical History In the last 3 months, how many times did your child visit a health centre for a reason other than vaccination? 5435 2205 0 0 1750 1 1-2 3040 2 3-5 630 3 6-10 10 4 >10 0 8 Unknown 5 9 Missing 9 Sysmiss 2196 Health centre in last 3 months v2 onwards Past Medical History 3680 0 Health centre in last 3 months v2 onwards Past Medical History 288 7352 20101 999999 70033.042 Health centre in last 3 months v2 onwards Past Medical History 31 7609 20101 900000 77184.774 Health centre in last 3 months v2 onwards Past Medical History In those visits, which health centre(s) did you visit? 0 7640 8 Unknown 0 9 Missing 0 Sysmiss 7640 Long term medical problems Past Medical History Does your child have any long term medical problems If N or Don't know skip to Q42 (Does your child take any regular medication?) 7621 19 0 No 7371 1 Yes 244 8 Unknown 6 9 Missing 19 Long term problem detail Past Medical History Do you know what this problem is? 244 0 Regular medication Past Medical History Does your child take any regular medication? If N or Don't know skip to Q44 (Blantyre Coma Score ) 7619 21 0 No 7386 1 Yes 214 8 Unknown 19 9 Missing 21 What medication Past Medical History Do you know what those medications are? 214 0 Health passport seen Vaccine history Health passport seen? 6602 1038 0 No 304 1 Yes 6298 8 Unknown 0 9 Missing 1038 BCG Vaccine history BCG given 7164 476 0 No 189 1 Yes 6975 8 Unknown 0 9 Missing 476 BCG date Vaccine history BCG given date 5916 2006-10-26 2015-10-23 BCGdate date est Vaccine history BCG given date estimates 5 7635 1 Full date known 0 2 Day unknown 0 3 Month unknown 0 4 Day and month unknown 5 8 Not known at all 0 9 Missing 0 Sysmiss 7635 Polio0 Vaccine history Polio0 given 6959 681 0 No 1581 1 Yes 5378 8 Unknown 0 9 Missing 681 Polio0 date Vaccine history Polio0 given date 4382 2006-10-31 2015-11-26 P0DATE date est Vaccine history P0 given date estimates 0 7640 1 Full date known 0 2 Day unknown 0 3 Month unknown 0 4 Day and month unknown 0 8 Not known at all 0 9 Missing 0 Sysmiss 7640 Vaccination HC visit 1 Vaccine history Vaccination Health centre 6990 0 Penta1 Vaccine history Penta 1 given 7137 503 0 No 306 1 Yes 6831 8 Unknown 0 9 Missing 503 Penta1 date Vaccine history Penta 1 given date 5837 2006-10-24 2016-01-23 DPTHH1DATE date est Vaccine history DPTHH1 given date estimates 0 7640 1 Full date known 0 2 Day unknown 0 3 Month unknown 0 4 Day and month unknown 0 8 Not known at all 0 9 Missing 0 Sysmiss 7640 Polio1 Vaccine history Polio 1 given 7118 522 0 No 337 1 Yes 6781 8 Unknown 0 9 Missing 522 Polio1date Vaccine history Polio 1 given date 5802 2006-10-24 2015-09-29 P1DATE date est Vaccine history P1 given date estimates 0 7640 1 Full date known 0 2 Day unknown 0 3 Month unknown 0 4 Day and month unknown 0 8 Not known at all 0 9 Missing 0 Sysmiss 7640 PCV1 Vaccine history PCV1 given 5916 1724 0 No 1073 1 Yes 4843 8 Unknown 0 9 Missing 1724 PCV1 date Vaccine history PCV1 given date 4315 2010-08-22 2015-12-09 PCV1DATE date est Vaccine history PCV1 given date estimates 1 7639 1 Full date known 0 2 Day unknown 1 3 Month unknown 0 4 Day and month unknown 0 8 Not known at all 0 9 Missing 0 Sysmiss 7639 RV1 Vaccine history RV1 given 4994 2646 0 No 2552 1 Yes 2442 8 Unknown 0 9 Missing 2646 RV1 date Vaccine history RV1 given date 2165 2010-04-23 2015-09-29 RV1DATE date est Vaccine history 0 7640 1 Full date known 0 2 Day unknown 0 3 Month unknown 0 4 Day and month unknown 0 8 Not known at all 0 9 Missing 0 Sysmiss 7640 Vaccination HC visit 2 Vaccine history Vaccination Health centre 6869 0 Penta2 Vaccine history Penta 2 given 7071 569 0 No 469 1 Yes 6602 8 Unknown 0 9 Missing 569 Penta2 date Vaccine history Penta 2 date 5611 2006-11-28 2015-12-01 DPTHH2DATE date est Vaccine history Penta 2 given date estimate 0 7640 1 Full date known 0 2 Day unknown 0 3 Month unknown 0 4 Day and month unknown 0 8 Not known at all 0 9 Missing 0 Sysmiss 7640 Polio2 Vaccine history Polio 2 given 7033 607 0 No 531 1 Yes 6502 8 Unknown 0 9 Missing 607 Polio2 date Vaccine history 5523 2006-11-24 2015-12-02 P2DATE date est Vaccine history P2 given date estimates 0 7640 1 Full date known 0 2 Day unknown 0 3 Month unknown 0 4 Day and month unknown 0 8 Not known at all 0 9 Missing 0 Sysmiss 7640 PCV2 Vaccine history PCV2 given 5726 1914 0 No 1300 1 Yes 4426 8 Unknown 0 9 Missing 1914 PCV2 date Vaccine history PCV2 given date 3901 2010-02-21 2015-12-01 PCV2DATE date est Vaccine history 0 7640 1 Full date known 0 2 Day unknown 0 3 Month unknown 0 4 Day and month unknown 0 8 Not known at all 0 9 Missing 0 Sysmiss 7640 RV2 Vaccine history RV2 given 4929 2711 0 No 2746 1 Yes 2183 8 Unknown 0 9 Missing 2711 RV2 date Vaccine history RV2 given date 1905 2010-08-27 2015-10-13 RV2DATE date est Vaccine history RV2 given date estimates 0 7640 1 Full date known 0 2 Day unknown 0 3 Month unknown 0 4 Day and month unknown 0 8 Not known at all 0 9 Missing 0 Sysmiss 7640 Vaccination HC visit 3 Vaccine history Vaccination Health centre 6633 0 Penta3 Vaccine history Penta 3 given 6991 649 0 No 720 1 Yes 6271 8 Unknown 0 9 Missing 649 Penta3 date Vaccine history Penta 3 date 5286 2007-01-23 2015-11-27 DPTHH3DATE date est Vaccine history Penta3 given date estimates 0 7640 1 Full date known 0 2 Day unknown 0 3 Month unknown 0 4 Day and month unknown 0 8 Not known at all 0 9 Missing 0 Sysmiss 7640 Polio3 Vaccine history Polio 3 given 6919 721 0 No 909 1 Yes 6010 8 Unknown 0 9 Missing 721 Polio3 date Vaccine history Polio 3 given date 5032 2007-01-23 2015-11-04 P3DATE date est Vaccine history Polio3 given date estimates 0 7640 1 Full date known 0 2 Day unknown 0 3 Month unknown 0 4 Day and month unknown 0 8 Not known at all 0 9 Missing 0 Sysmiss 7640 PCV3 Vaccine history PCV3 given 5546 2094 0 No 1672 1 Yes 3874 8 Unknown 0 9 Missing 2094 PCV3 date Vaccine history PCV3 given date 3356 2002-12-20 2015-11-03 PCV2DATE date est Vaccine history PCV3 given date estimates 0 7640 1 Full date known 0 2 Day unknown 0 3 Month unknown 0 4 Day and month unknown 0 8 Not known at all 0 9 Missing 0 Sysmiss 7640 Vaccination HC visit 4 Vaccine history Vaccination Health centre 6321 0 Measles Vaccine history Measles given 6565 1075 0 No 1838 1 Yes 4727 8 Unknown 0 9 Missing 1075 Measles date Vaccine history Measles given date 3745 2007-02-20 2015-12-20 MEASDATE date est Vaccine history MEAS given date estimates 3 7637 1 Full date known 0 2 Day unknown 1 3 Month unknown 0 4 Day and month unknown 2 8 Not known at all 0 9 Missing 0 Sysmiss 7637 Measles vaccination HC Vaccine history Measles vaccination Health centre 4727 0 No. of doses of vitamin A Vaccine history No. of doses of vitamin A Vaccine history 6607 1033 98 Unknown 99 Missing Date of dose 1 Vaccine history Record dates of the first two doses vit A 3478 2007-06-15 2015-11-15 Vitamin A dose date1 incomplete Vaccine history Vitamin A dose date1 incomplete? 2988 4652 1 Full date known 0 2 Day unknown 2985 3 Month unknown 0 4 Day and month unknown 3 8 Not known at all 0 9 Missing 0 Sysmiss 4652 Date of dose 2 Vaccine history Record dates of the first two doses vit A 1423 2008-01-15 2015-11-15 Date of dose 2 incomplete Vaccine history Vitamin A dose date2 incomplete? 35 7605 1 Full date known 0 2 Day unknown 34 3 Month unknown 0 4 Day and month unknown 1 8 Not known at all 0 9 Missing 0 Sysmiss 7605 Blantyre Coma Score Examination Blantyre Coma Score 7559 81 1 1 2 1 3 3 4 5 5 7549 8 Unknown 0 9 Missing 81 General appearance Examination General appearance 7569 71 1 Well, alert 7421 2 Restless, irritable 121 3 Lethargic, unconscious 27 9 Missing 71 Skin pinch Examination Skin pinch goes back… 7520 120 1 Immediately 7492 2 1-2 seconds 27 3 >2 seconds 1 9 Missing 120 Sunken eyes Examination Sunken eyes 7640 0 0 No 7441 1 Yes 199 8 Unknown 0 9 Missing 0 Pallor Examination Pallor 7640 0 0 No 7194 1 Yes 446 8 Unknown 0 9 Missing 0 Finger clubbing Examination Finger clubbing 7640 0 0 No 7636 1 Yes 4 8 Unknown 0 9 Missing 0 Jaundice Examination Jaundice 7640 0 0 No 7606 1 Yes 34 8 Unknown 0 9 Missing 0 Oedema Examination Oedema 7640 0 0 No 7629 1 Yes 11 8 Unknown 0 9 Missing 0 Rash Examination Rash 7640 0 0 No 7559 1 Yes 81 8 Unknown 0 9 Missing 0 Nasal flaring Examination Nasal flaring 7640 0 0 No 7343 1 Yes 297 8 Unknown 0 9 Missing 0 Stridor Examination Stridor 7640 0 0 No 7635 1 Yes 5 8 Unknown 0 9 Missing 0 Thrush Examination Oral thrush/sores 7640 0 0 No 7602 1 Yes 38 8 Unknown 0 9 Missing 0 Neck stiffness Examination Neck stiffness 7640 0 0 No 7638 1 Yes 2 8 Unknown 0 9 Missing 0 Lymphadenopathy Examination Lymphadenopathy 7638 2 0 No 7623 1 Yes 15 8 Unknown 0 9 Missing 2 Lower chest wall indrawing Examination Lower chest wall indrawing 7639 1 0 No 7025 1 Yes 614 8 Unknown 0 9 Missing 1 Wheeze Examination Wheeze 7638 2 0 No 7209 1 Yes 429 8 Unknown 0 9 Missing 2 Grunting Examination Grunting 7631 9 0 No 7562 1 Yes 68 8 Unknown 1 9 Missing 9 Crackle Examination Crackles 7640 0 0 No 7139 1 Left 60 2 Right 71 3 Bilateral 370 8 Unknown 0 9 Missing 0 Bronchial breathing Examination Bronchial Breathing 7640 0 0 No 7090 1 Left 4 2 Right 1 3 Bilateral 545 8 Unknown 0 9 Missing 0 Reduced air entry Examination Reduced air entry 7640 0 0 No 7595 1 Left 1 2 Right 4 3 Bilateral 40 8 Unknown 0 9 Missing 0 Hepatomegaly Examination Hepatomegaly 7640 0 0 No 7619 1 Yes 21 8 Unknown 0 9 Missing 0 Splenomegaly Examination Splenomegaly 7640 0 0 No 7450 1 Yes 190 8 Unknown 0 9 Missing 0 Cardiac abnormality Examination Cardiac abnormality 7640 0 0 No 7614 1 Yes 26 8 Unknown 0 9 Missing 0 Ear abnormality Examination Ear abnormality 7640 0 0 No 7629 1 Yes 11 8 Unknown 0 9 Missing 0 Neuro abnormality Examination Neurological abnormality 7640 0 0 No 7633 1 Yes 7 8 Unknown 0 9 Missing 0 Other abnormality Examination Other If Yes specify 7606 34 0 No 6684 1 Yes 922 8 Unknown 0 9 Missing 34 Confirmed Diagnosis 1 Diagnosis 7640 0 Confirmed Diagnosis 2 Diagnosis 2946 0 Confirmed Diagnosis 3 Diagnosis 186 0 Staff code diagnosis Diagnosis Clinic staff code (confirmed diagnosis) 2889 0 Staff code examiner Clinic staff code (examiner) 7640 0 Chest xray requested Investigation Chest X ray requested 7584 56 0 No 6881 1 Yes 703 8 Unknown 0 9 Missing 56 Chest xray collected Investigation X ray collected 323 7317 0 No 19 1 Yes 304 8 Unknown 0 9 Missing 380 Sysmiss 6937 HIV rapid requested Investigation HIV rapid test requested 7494 146 0 No 4753 1 Yes 2741 8 Unknown 0 9 Missing 146 HIV rapid collected Investigation HIV rapid test collected 2665 4975 0 No 80 1 Yes 2585 8 Unknown 0 9 Missing 76 Sysmiss 4899 HIV PCR requested Investigation HIV PCR requested 7601 39 0 No 7575 1 Yes 26 8 Unknown 0 9 Missing 39 HIV PCR collected Investigation HIV PCR collected 25 7615 0 No 5 1 Yes 20 8 Unknown 0 9 Missing 1 Sysmiss 7614 FBC requested Investigation FBC requested 7603 37 0 No 7237 1 Yes 366 8 Unknown 0 9 Missing 37 FBC collected Investigation FBC collected 338 7302 0 No 60 1 Yes 278 8 Unknown 0 9 Missing 28 Sysmiss 7274 MPs requested Investigation MPs requested 7637 3 0 No 175 1 Yes 7462 8 Unknown 0 9 Missing 3 Mps collected Investigation MPs collected 7296 344 0 No 5 1 Yes 7291 8 Unknown 0 9 Missing 166 Sysmiss 178 Blood culture requested Investigation Blood culture requested 2191 5449 0 No 2190 1 Yes 1 8 Unknown 0 9 Missing 5 Sysmiss 5444 Blood culture collected Investigation Blood culture collected 0 7640 0 No 0 1 Yes 0 8 Unknown 0 9 Missing 1 Sysmiss 7639 NP aspirate requested Investigation NP aspirate requested 7609 31 0 No 7609 1 Yes 0 8 Unknown 0 9 Missing 31 NP aspirate collected Investigation NP aspirate collected 0 7640 0 No 0 1 Yes 0 8 Unknown 0 9 Missing 0 Sysmiss 7640 NP swab requested Investigation NP swab requested 7608 32 0 No 7608 1 Yes 0 8 Unknown 0 9 Missing 32 NP swab collected Investigation NP swab collected 0 7640 0 No 0 1 Yes 0 8 Unknown 0 9 Missing 0 Sysmiss 7640 Stool sample requested Investigation Stool sample requested 7617 23 0 No 6212 1 Yes 1405 8 Unknown 0 9 Missing 23 Stool sample collected Investigation Stool sample collected 1107 6533 0 No 622 1 Yes 485 8 Unknown 0 9 Missing 298 Sysmiss 6235 Other sample requested Investigation Other sample requested 7600 40 0 No 7595 1 Yes 5 8 Unknown 0 9 Missing 40 Other sample collected Investigation Other sample collected Type 2 7638 0 No 0 1 Yes 2 8 Unknown 0 9 Missing 3 Sysmiss 7635 Staff code - specimens Clinic staff code (specimens). 2889 0 Staff code - investigations Staffcode of investigations clinician 4751 0 Date of discharge To be completed upon discharge Date of discharge 65 2011-10-10 2015-10-07 Disposition To be completed upon discharge Disposition 65 7575 1 Home 60 2 Transfer 3 3 Died 0 8 Unknown 2 9 Missing 0 Sysmiss 7575 Received IV fluids To be completed upon discharge Received IV fluids (WHO Plan C) 65 7575 0 No 62 1 Yes 3 8 Unknown 0 9 Missing 0 Sysmiss 7575 Received oxygen To be completed upon discharge Received oxygen 65 7575 0 No 65 1 Yes 0 8 Unknown 0 9 Missing 0 Sysmiss 7575 Staff code - discharge Clinic staff code (discharge) 65 0 Coder Coder 7640 0 Checker Level2 checker 7640 0 entry by Entered by staff code 7638 0 update by Updated by staff code 2884 0 Entry date Entry date 7629 2011-09-13 2016-01-27 Update date Update date 2884 2011-09-14 2016-01-27 verified Verified flag 7640 0 0 No 0 1 Yes 7640 8 Unknown 0 9 Missing 0 Form version Version 7640 0 Study identifier Study identifier 7640 0 Contact number Contact number 7640 0 Interview date Interview date 7640 2011-08-22 2015-11-30 Main Unique identifier in Karonga Name 7640 0 Original Ident in Karonga Name 7640 0 main unique identifier of the mother Name of mother 7640 0 Original ident of mother before combine Name of mother 7640 0 Mothers status Mothers status(Alive/Dead) 7600 40 1 Alive 7581 2 Dead 19 8 Unknown 0 9 Missing 40 Fathers status Fathers status(Alive/Dead) 7364 276 1 Alive 7294 2 Dead 70 3 Left 0 4 Missed 0 8 Unknown 0 9 Missing 276 Current village Village/suburb living now If same as Q9(Village/suburb of birth) circle: AA 7640 0 Study site Study site 7640 0 1 KPS 7640 2 Mchinji 0 3 Blantyre 0 8 Unknown 0 9 Missing 0 Consent Consented 7640 0 1 Accepted 7640 2 Refused 0 8 Unknown 0 9 Missing 0 Refusal reason Reason refused 0 7640 0 No reason 0 1 No time 0 2 Not interested 0 3 Fear of enrolling 0 4 Other reason 0 8 Unknown 0 9 Missing 0 Sysmiss 7640 Other refusal reason Other refusal reason 0 0 Informant Informant 7640 0 1 Father 227 2 Mother 7283 3 Guardian 21 4 Other relative 109 9 Missing 0 Study classification Study classification If Control go to Q25(Clinic staff code) 2196 5444 0 Control 0 1 Case 2196 8 Unknown 0 9 Missing 0 Sysmiss 5444 Case date Case date date of presentation to hospital, then à go to Q23(Mothers STID). 2196 2011-08-22 2012-08-09 Corresponding case Study identifier STID of matched corresponding case Corresponding case Study identifier 0 0 Mothers Study identifier If RTF filled for mother Mothers STID 5960 0 Mothers Contact number If RTF filled for mother Mothers Contact number 5960 0 Staff code Clinic staff code 7640 0 Coder Coder 7640 0 Checker Level1 checker 7640 0 Entered by staff code Entered by staff code 7640 0 Updated by staff code Updated by staff code 613 0 Entry date Entry date 7640 2011-09-05 2016-02-15 Update date Update date 611 2011-09-06 2016-02-04 Verified flag Verified flag 7640 0 0 No 0 1 Yes 7640 8 Unknown 0 9 Missing 0